Protein–RNA interactions for Protein: Q99LM3

Smtnl1, Smoothelin-like protein 1, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smtnl1Q99LM3 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smtnl1Q99LM3 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smtnl1Q99LM3 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smtnl1Q99LM3 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smtnl1Q99LM3 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smtnl1Q99LM3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smtnl1Q99LM3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smtnl1Q99LM3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smtnl1Q99LM3 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.27■□□□□ 0.36
Smtnl1Q99LM3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smtnl1Q99LM3 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smtnl1Q99LM3 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smtnl1Q99LM3 Gm45328-201ENSMUST00000210942 917 ntBASIC17.27■□□□□ 0.36
Smtnl1Q99LM3 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.27■□□□□ 0.36
Smtnl1Q99LM3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Smtnl1Q99LM3 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Smtnl1Q99LM3 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Smtnl1Q99LM3 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smtnl1Q99LM3 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smtnl1Q99LM3 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smtnl1Q99LM3 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smtnl1Q99LM3 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Smtnl1Q99LM3 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smtnl1Q99LM3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smtnl1Q99LM3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.27■□□□□ 0.35
Smtnl1Q99LM3 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Smtnl1Q99LM3 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smtnl1Q99LM3 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smtnl1Q99LM3 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smtnl1Q99LM3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smtnl1Q99LM3 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smtnl1Q99LM3 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smtnl1Q99LM3 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smtnl1Q99LM3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smtnl1Q99LM3 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Smtnl1Q99LM3 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smtnl1Q99LM3 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smtnl1Q99LM3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smtnl1Q99LM3 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smtnl1Q99LM3 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smtnl1Q99LM3 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smtnl1Q99LM3 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smtnl1Q99LM3 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smtnl1Q99LM3 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smtnl1Q99LM3 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Smtnl1Q99LM3 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Smtnl1Q99LM3 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smtnl1Q99LM3 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smtnl1Q99LM3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smtnl1Q99LM3 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smtnl1Q99LM3 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smtnl1Q99LM3 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smtnl1Q99LM3 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Smtnl1Q99LM3 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smtnl1Q99LM3 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smtnl1Q99LM3 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smtnl1Q99LM3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Smtnl1Q99LM3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Smtnl1Q99LM3 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smtnl1Q99LM3 Gm11950-201ENSMUST00000121615 838 ntBASIC17.25■□□□□ 0.35
Smtnl1Q99LM3 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smtnl1Q99LM3 Gm25016-201ENSMUST00000158399 131 ntBASIC17.25■□□□□ 0.35
Smtnl1Q99LM3 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.25■□□□□ 0.35
Smtnl1Q99LM3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smtnl1Q99LM3 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.25■□□□□ 0.35
Smtnl1Q99LM3 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Smtnl1Q99LM3 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smtnl1Q99LM3 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smtnl1Q99LM3 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Smtnl1Q99LM3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smtnl1Q99LM3 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.25■□□□□ 0.35
Smtnl1Q99LM3 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smtnl1Q99LM3 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smtnl1Q99LM3 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Smtnl1Q99LM3 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smtnl1Q99LM3 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smtnl1Q99LM3 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smtnl1Q99LM3 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smtnl1Q99LM3 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.24■□□□□ 0.35
Smtnl1Q99LM3 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smtnl1Q99LM3 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smtnl1Q99LM3 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smtnl1Q99LM3 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smtnl1Q99LM3 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smtnl1Q99LM3 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.24■□□□□ 0.35
Smtnl1Q99LM3 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smtnl1Q99LM3 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.24■□□□□ 0.35
Smtnl1Q99LM3 Gm10231-201ENSMUST00000181584 441 ntBASIC17.24■□□□□ 0.35
Smtnl1Q99LM3 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smtnl1Q99LM3 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smtnl1Q99LM3 Gm10175-202ENSMUST00000208752 441 ntBASIC17.24■□□□□ 0.35
Smtnl1Q99LM3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smtnl1Q99LM3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.24■□□□□ 0.35
Smtnl1Q99LM3 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smtnl1Q99LM3 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smtnl1Q99LM3 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Smtnl1Q99LM3 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smtnl1Q99LM3 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Smtnl1Q99LM3 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smtnl1Q99LM3 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms