Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Usp11Q99K46 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.63■□□□□ 0.25
Usp11Q99K46 Gm7367-201ENSMUST00000057611 492 ntBASIC16.63■□□□□ 0.25
Usp11Q99K46 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp11Q99K46 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp11Q99K46 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Usp11Q99K46 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp11Q99K46 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Usp11Q99K46 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp11Q99K46 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp11Q99K46 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp11Q99K46 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp11Q99K46 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp11Q99K46 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Usp11Q99K46 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp11Q99K46 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp11Q99K46 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp11Q99K46 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp11Q99K46 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp11Q99K46 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp11Q99K46 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.62■□□□□ 0.25
Usp11Q99K46 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp11Q99K46 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Usp11Q99K46 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Usp11Q99K46 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Usp11Q99K46 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.62■□□□□ 0.25
Usp11Q99K46 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp11Q99K46 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Usp11Q99K46 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp11Q99K46 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.62■□□□□ 0.25
Usp11Q99K46 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.62■□□□□ 0.25
Usp11Q99K46 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
Usp11Q99K46 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Usp11Q99K46 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Usp11Q99K46 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp11Q99K46 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.62■□□□□ 0.25
Usp11Q99K46 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp11Q99K46 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Usp11Q99K46 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp11Q99K46 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.61■□□□□ 0.25
Usp11Q99K46 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp11Q99K46 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp11Q99K46 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp11Q99K46 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp11Q99K46 Gm15794-201ENSMUST00000120182 631 ntBASIC16.61■□□□□ 0.25
Usp11Q99K46 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp11Q99K46 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.61■□□□□ 0.25
Usp11Q99K46 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Usp11Q99K46 Gm27742-201ENSMUST00000184667 60 ntBASIC16.61■□□□□ 0.25
Usp11Q99K46 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp11Q99K46 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp11Q99K46 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Usp11Q99K46 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp11Q99K46 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp11Q99K46 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Usp11Q99K46 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Usp11Q99K46 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Usp11Q99K46 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Usp11Q99K46 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp11Q99K46 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.61■□□□□ 0.25
Usp11Q99K46 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Usp11Q99K46 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp11Q99K46 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp11Q99K46 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp11Q99K46 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Usp11Q99K46 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Usp11Q99K46 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Usp11Q99K46 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.6■□□□□ 0.25
Usp11Q99K46 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp11Q99K46 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp11Q99K46 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.6■□□□□ 0.25
Usp11Q99K46 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp11Q99K46 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Usp11Q99K46 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp11Q99K46 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Usp11Q99K46 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp11Q99K46 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Usp11Q99K46 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp11Q99K46 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp11Q99K46 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.6■□□□□ 0.25
Usp11Q99K46 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Usp11Q99K46 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Usp11Q99K46 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Usp11Q99K46 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp11Q99K46 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Usp11Q99K46 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Usp11Q99K46 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Usp11Q99K46 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp11Q99K46 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp11Q99K46 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp11Q99K46 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.59■□□□□ 0.25
Usp11Q99K46 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Usp11Q99K46 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp11Q99K46 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Usp11Q99K46 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Usp11Q99K46 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp11Q99K46 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Usp11Q99K46 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Usp11Q99K46 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.59■□□□□ 0.25
Usp11Q99K46 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms