Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdha11Q91Y19 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha11Q91Y19 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha11Q91Y19 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdha11Q91Y19 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha11Q91Y19 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha11Q91Y19 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.53■□□□□ 0.24
Pcdha11Q91Y19 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha11Q91Y19 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha11Q91Y19 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdha11Q91Y19 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha11Q91Y19 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha11Q91Y19 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdha11Q91Y19 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha11Q91Y19 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.53■□□□□ 0.24
Pcdha11Q91Y19 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha11Q91Y19 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.53■□□□□ 0.24
Pcdha11Q91Y19 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Pcdha11Q91Y19 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pcdha11Q91Y19 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha11Q91Y19 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha11Q91Y19 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha11Q91Y19 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha11Q91Y19 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha11Q91Y19 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha11Q91Y19 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdha11Q91Y19 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha11Q91Y19 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha11Q91Y19 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha11Q91Y19 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha11Q91Y19 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pcdha11Q91Y19 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha11Q91Y19 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha11Q91Y19 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha11Q91Y19 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha11Q91Y19 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha11Q91Y19 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha11Q91Y19 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdha11Q91Y19 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdha11Q91Y19 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.52■□□□□ 0.24
Pcdha11Q91Y19 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha11Q91Y19 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha11Q91Y19 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha11Q91Y19 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdha11Q91Y19 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdha11Q91Y19 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdha11Q91Y19 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdha11Q91Y19 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdha11Q91Y19 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.52■□□□□ 0.23
Pcdha11Q91Y19 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdha11Q91Y19 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha11Q91Y19 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha11Q91Y19 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha11Q91Y19 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha11Q91Y19 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha11Q91Y19 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.51■□□□□ 0.23
Pcdha11Q91Y19 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha11Q91Y19 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha11Q91Y19 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha11Q91Y19 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha11Q91Y19 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha11Q91Y19 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pcdha11Q91Y19 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha11Q91Y19 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha11Q91Y19 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha11Q91Y19 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha11Q91Y19 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha11Q91Y19 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha11Q91Y19 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.51■□□□□ 0.23
Pcdha11Q91Y19 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.51■□□□□ 0.23
Pcdha11Q91Y19 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcdha11Q91Y19 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha11Q91Y19 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha11Q91Y19 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha11Q91Y19 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha11Q91Y19 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha11Q91Y19 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha11Q91Y19 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pcdha11Q91Y19 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha11Q91Y19 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha11Q91Y19 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha11Q91Y19 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha11Q91Y19 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha11Q91Y19 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdha11Q91Y19 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha11Q91Y19 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pcdha11Q91Y19 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha11Q91Y19 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.5■□□□□ 0.23
Pcdha11Q91Y19 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha11Q91Y19 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha11Q91Y19 Gm27646-201ENSMUST00000183989 110 ntBASIC16.5■□□□□ 0.23
Pcdha11Q91Y19 Gm6550-201ENSMUST00000187574 993 ntBASIC16.5■□□□□ 0.23
Pcdha11Q91Y19 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha11Q91Y19 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.5■□□□□ 0.23
Pcdha11Q91Y19 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha11Q91Y19 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.5■□□□□ 0.23
Pcdha11Q91Y19 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha11Q91Y19 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha11Q91Y19 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Pcdha11Q91Y19 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms