Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha3Q91Y16 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha3Q91Y16 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha3Q91Y16 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha3Q91Y16 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha3Q91Y16 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdha3Q91Y16 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha3Q91Y16 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha3Q91Y16 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha3Q91Y16 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha3Q91Y16 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha3Q91Y16 Mir6404-201ENSMUST00000183699 94 ntBASIC16.46■□□□□ 0.23
Pcdha3Q91Y16 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha3Q91Y16 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Pcdha3Q91Y16 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha3Q91Y16 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha3Q91Y16 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha3Q91Y16 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha3Q91Y16 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha3Q91Y16 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdha3Q91Y16 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha3Q91Y16 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha3Q91Y16 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha3Q91Y16 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Pcdha3Q91Y16 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha3Q91Y16 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.45■□□□□ 0.22
Pcdha3Q91Y16 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha3Q91Y16 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha3Q91Y16 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha3Q91Y16 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.45■□□□□ 0.22
Pcdha3Q91Y16 Gm27867-201ENSMUST00000184778 125 ntBASIC16.45■□□□□ 0.22
Pcdha3Q91Y16 Gm27459-201ENSMUST00000184860 107 ntBASIC16.45■□□□□ 0.22
Pcdha3Q91Y16 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Pcdha3Q91Y16 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha3Q91Y16 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha3Q91Y16 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha3Q91Y16 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdha3Q91Y16 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha3Q91Y16 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha3Q91Y16 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdha3Q91Y16 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha3Q91Y16 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha3Q91Y16 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha3Q91Y16 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha3Q91Y16 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha3Q91Y16 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha3Q91Y16 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha3Q91Y16 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha3Q91Y16 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha3Q91Y16 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdha3Q91Y16 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha3Q91Y16 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha3Q91Y16 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.44■□□□□ 0.22
Pcdha3Q91Y16 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.44■□□□□ 0.22
Pcdha3Q91Y16 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Pcdha3Q91Y16 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha3Q91Y16 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.44■□□□□ 0.22
Pcdha3Q91Y16 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.44■□□□□ 0.22
Pcdha3Q91Y16 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.44■□□□□ 0.22
Pcdha3Q91Y16 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha3Q91Y16 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha3Q91Y16 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha3Q91Y16 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Pcdha3Q91Y16 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha3Q91Y16 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha3Q91Y16 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha3Q91Y16 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdha3Q91Y16 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha3Q91Y16 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha3Q91Y16 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdha3Q91Y16 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdha3Q91Y16 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha3Q91Y16 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Pcdha3Q91Y16 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha3Q91Y16 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha3Q91Y16 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha3Q91Y16 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha3Q91Y16 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha3Q91Y16 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Pcdha3Q91Y16 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha3Q91Y16 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.43■□□□□ 0.22
Pcdha3Q91Y16 Gm9172-201ENSMUST00000212092 954 ntBASIC16.43■□□□□ 0.22
Pcdha3Q91Y16 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.43■□□□□ 0.22
Pcdha3Q91Y16 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha3Q91Y16 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha3Q91Y16 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha3Q91Y16 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.43■□□□□ 0.22
Pcdha3Q91Y16 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdha3Q91Y16 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Pcdha3Q91Y16 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha3Q91Y16 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdha3Q91Y16 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdha3Q91Y16 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha3Q91Y16 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha3Q91Y16 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha3Q91Y16 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha3Q91Y16 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Pcdha3Q91Y16 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdha3Q91Y16 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Pcdha3Q91Y16 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms