Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhac1Q91Y10 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhac1Q91Y10 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhac1Q91Y10 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Pcdhac1Q91Y10 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.77□□□□□ -0.04
Pcdhac1Q91Y10 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.77□□□□□ -0.05
Pcdhac1Q91Y10 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhac1Q91Y10 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhac1Q91Y10 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhac1Q91Y10 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhac1Q91Y10 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhac1Q91Y10 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhac1Q91Y10 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhac1Q91Y10 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhac1Q91Y10 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhac1Q91Y10 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhac1Q91Y10 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhac1Q91Y10 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.77□□□□□ -0.05
Pcdhac1Q91Y10 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhac1Q91Y10 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pcdhac1Q91Y10 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhac1Q91Y10 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhac1Q91Y10 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhac1Q91Y10 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhac1Q91Y10 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhac1Q91Y10 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhac1Q91Y10 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhac1Q91Y10 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhac1Q91Y10 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhac1Q91Y10 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.76□□□□□ -0.05
Pcdhac1Q91Y10 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhac1Q91Y10 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhac1Q91Y10 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhac1Q91Y10 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.76□□□□□ -0.05
Pcdhac1Q91Y10 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.76□□□□□ -0.05
Pcdhac1Q91Y10 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhac1Q91Y10 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhac1Q91Y10 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhac1Q91Y10 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhac1Q91Y10 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhac1Q91Y10 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhac1Q91Y10 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhac1Q91Y10 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhac1Q91Y10 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhac1Q91Y10 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhac1Q91Y10 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhac1Q91Y10 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhac1Q91Y10 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhac1Q91Y10 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pcdhac1Q91Y10 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pcdhac1Q91Y10 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.76□□□□□ -0.05
Pcdhac1Q91Y10 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhac1Q91Y10 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhac1Q91Y10 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.75□□□□□ -0.05
Pcdhac1Q91Y10 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.75□□□□□ -0.05
Pcdhac1Q91Y10 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhac1Q91Y10 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhac1Q91Y10 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhac1Q91Y10 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhac1Q91Y10 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhac1Q91Y10 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Pcdhac1Q91Y10 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Pcdhac1Q91Y10 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhac1Q91Y10 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Pcdhac1Q91Y10 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Pcdhac1Q91Y10 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.75□□□□□ -0.05
Pcdhac1Q91Y10 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Pcdhac1Q91Y10 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Pcdhac1Q91Y10 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhac1Q91Y10 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Pcdhac1Q91Y10 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhac1Q91Y10 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhac1Q91Y10 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhac1Q91Y10 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Pcdhac1Q91Y10 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Pcdhac1Q91Y10 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Pcdhac1Q91Y10 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhac1Q91Y10 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhac1Q91Y10 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.74□□□□□ -0.05
Pcdhac1Q91Y10 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhac1Q91Y10 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhac1Q91Y10 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhac1Q91Y10 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhac1Q91Y10 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhac1Q91Y10 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhac1Q91Y10 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhac1Q91Y10 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhac1Q91Y10 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhac1Q91Y10 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhac1Q91Y10 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhac1Q91Y10 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhac1Q91Y10 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhac1Q91Y10 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhac1Q91Y10 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Pcdhac1Q91Y10 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhac1Q91Y10 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhac1Q91Y10 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhac1Q91Y10 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhac1Q91Y10 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Pcdhac1Q91Y10 App-207ENSMUST00000227737 2827 ntBASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms