Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.38■□□□□ 0.21
Pcdhb1Q91Y08 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb1Q91Y08 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb1Q91Y08 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb1Q91Y08 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb1Q91Y08 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb1Q91Y08 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb1Q91Y08 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb1Q91Y08 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb1Q91Y08 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.38■□□□□ 0.21
Pcdhb1Q91Y08 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb1Q91Y08 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb1Q91Y08 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.38■□□□□ 0.21
Pcdhb1Q91Y08 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb1Q91Y08 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb1Q91Y08 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb1Q91Y08 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb1Q91Y08 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb1Q91Y08 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb1Q91Y08 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhb1Q91Y08 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhb1Q91Y08 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb1Q91Y08 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhb1Q91Y08 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb1Q91Y08 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb1Q91Y08 Gm25745-201ENSMUST00000174945 133 ntBASIC16.37■□□□□ 0.21
Pcdhb1Q91Y08 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb1Q91Y08 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb1Q91Y08 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb1Q91Y08 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb1Q91Y08 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.37■□□□□ 0.21
Pcdhb1Q91Y08 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb1Q91Y08 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb1Q91Y08 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb1Q91Y08 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb1Q91Y08 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb1Q91Y08 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb1Q91Y08 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdhb1Q91Y08 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.36■□□□□ 0.21
Pcdhb1Q91Y08 Gm27867-201ENSMUST00000184778 125 ntBASIC16.36■□□□□ 0.21
Pcdhb1Q91Y08 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb1Q91Y08 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb1Q91Y08 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb1Q91Y08 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb1Q91Y08 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb1Q91Y08 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb1Q91Y08 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhb1Q91Y08 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhb1Q91Y08 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb1Q91Y08 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb1Q91Y08 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb1Q91Y08 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pcdhb1Q91Y08 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.35■□□□□ 0.21
Pcdhb1Q91Y08 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb1Q91Y08 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb1Q91Y08 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb1Q91Y08 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb1Q91Y08 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.35■□□□□ 0.21
Pcdhb1Q91Y08 Gm17807-201ENSMUST00000186869 298 ntBASIC16.35■□□□□ 0.21
Pcdhb1Q91Y08 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb1Q91Y08 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb1Q91Y08 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb1Q91Y08 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb1Q91Y08 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Pcdhb1Q91Y08 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb1Q91Y08 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb1Q91Y08 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhb1Q91Y08 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb1Q91Y08 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb1Q91Y08 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb1Q91Y08 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb1Q91Y08 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb1Q91Y08 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb1Q91Y08 Gm12895-201ENSMUST00000122214 226 ntBASIC16.34■□□□□ 0.21
Pcdhb1Q91Y08 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Pcdhb1Q91Y08 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Pcdhb1Q91Y08 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.34■□□□□ 0.21
Pcdhb1Q91Y08 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb1Q91Y08 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb1Q91Y08 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb1Q91Y08 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.34■□□□□ 0.21
Pcdhb1Q91Y08 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb1Q91Y08 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb1Q91Y08 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb1Q91Y08 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb1Q91Y08 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhb1Q91Y08 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb1Q91Y08 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb1Q91Y08 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb1Q91Y08 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb1Q91Y08 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb1Q91Y08 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhb1Q91Y08 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb1Q91Y08 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb1Q91Y08 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb1Q91Y08 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb1Q91Y08 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb1Q91Y08 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhb1Q91Y08 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdhb1Q91Y08 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms