Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb2Q91Y00 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.71■□□□□ 0.27
Pcdhb2Q91Y00 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb2Q91Y00 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhb2Q91Y00 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdhb2Q91Y00 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb2Q91Y00 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb2Q91Y00 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb2Q91Y00 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhb2Q91Y00 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb2Q91Y00 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb2Q91Y00 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb2Q91Y00 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdhb2Q91Y00 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Pcdhb2Q91Y00 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdhb2Q91Y00 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdhb2Q91Y00 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Gm18622-201ENSMUST00000219361 595 ntBASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb2Q91Y00 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb2Q91Y00 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb2Q91Y00 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.69■□□□□ 0.26
Pcdhb2Q91Y00 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb2Q91Y00 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.69■□□□□ 0.26
Pcdhb2Q91Y00 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb2Q91Y00 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb2Q91Y00 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb2Q91Y00 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb2Q91Y00 Gm7862-201ENSMUST00000121461 292 ntBASIC16.69■□□□□ 0.26
Pcdhb2Q91Y00 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb2Q91Y00 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb2Q91Y00 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Pcdhb2Q91Y00 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb2Q91Y00 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb2Q91Y00 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb2Q91Y00 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb2Q91Y00 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb2Q91Y00 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb2Q91Y00 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb2Q91Y00 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb2Q91Y00 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb2Q91Y00 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb2Q91Y00 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb2Q91Y00 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdhb2Q91Y00 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.68■□□□□ 0.26
Pcdhb2Q91Y00 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb2Q91Y00 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb2Q91Y00 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb2Q91Y00 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb2Q91Y00 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhb2Q91Y00 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdhb2Q91Y00 Gm13418-201ENSMUST00000119097 944 ntBASIC16.68■□□□□ 0.26
Pcdhb2Q91Y00 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhb2Q91Y00 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhb2Q91Y00 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.68■□□□□ 0.26
Pcdhb2Q91Y00 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb2Q91Y00 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb2Q91Y00 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb2Q91Y00 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Pcdhb2Q91Y00 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb2Q91Y00 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhb2Q91Y00 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pcdhb2Q91Y00 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb2Q91Y00 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb2Q91Y00 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms