Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm44486-201ENSMUST00000198508 138 ntBASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Gm44314-201ENSMUST00000199263 138 ntBASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Gm44394-201ENSMUST00000199558 138 ntBASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Gm44484-201ENSMUST00000199873 138 ntBASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Gm44466-201ENSMUST00000200264 138 ntBASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Gm44359-201ENSMUST00000200671 138 ntBASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Gm34272-201ENSMUST00000208886 253 ntBASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Gm10355-201ENSMUST00000097146 517 ntBASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Gm7862-201ENSMUST00000121461 292 ntBASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Gm8825-201ENSMUST00000182565 998 ntBASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Gm4518-201ENSMUST00000182638 718 ntBASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Gm44548-201ENSMUST00000208929 192 ntBASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhb20Q91XZ9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb20Q91XZ9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb20Q91XZ9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb20Q91XZ9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb20Q91XZ9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb20Q91XZ9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb20Q91XZ9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.23■□□□□ 0.03
Pcdhb20Q91XZ9 Gm8097-201ENSMUST00000117903 829 ntBASIC15.23■□□□□ 0.03
Pcdhb20Q91XZ9 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.23■□□□□ 0.03
Pcdhb20Q91XZ9 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb20Q91XZ9 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb20Q91XZ9 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb20Q91XZ9 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb20Q91XZ9 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb20Q91XZ9 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb20Q91XZ9 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhb20Q91XZ9 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.23■□□□□ 0.03
Pcdhb20Q91XZ9 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.23■□□□□ 0.03
Pcdhb20Q91XZ9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb20Q91XZ9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb20Q91XZ9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb20Q91XZ9 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Pcdhb20Q91XZ9 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb20Q91XZ9 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb20Q91XZ9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb20Q91XZ9 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb20Q91XZ9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms