Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga3Q91XY5 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga3Q91XY5 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga3Q91XY5 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga3Q91XY5 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga3Q91XY5 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga3Q91XY5 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga3Q91XY5 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pcdhga3Q91XY5 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga3Q91XY5 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga3Q91XY5 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga3Q91XY5 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga3Q91XY5 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga3Q91XY5 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga3Q91XY5 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga3Q91XY5 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga3Q91XY5 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga3Q91XY5 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Pcdhga3Q91XY5 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga3Q91XY5 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga3Q91XY5 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga3Q91XY5 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga3Q91XY5 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga3Q91XY5 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga3Q91XY5 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.06□□□□□ -0.16
Pcdhga3Q91XY5 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga3Q91XY5 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pcdhga3Q91XY5 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga3Q91XY5 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga3Q91XY5 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga3Q91XY5 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.06□□□□□ -0.16
Pcdhga3Q91XY5 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdhga3Q91XY5 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga3Q91XY5 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga3Q91XY5 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga3Q91XY5 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga3Q91XY5 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga3Q91XY5 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga3Q91XY5 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Pcdhga3Q91XY5 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
Pcdhga3Q91XY5 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.05□□□□□ -0.16
Pcdhga3Q91XY5 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga3Q91XY5 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga3Q91XY5 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Pcdhga3Q91XY5 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga3Q91XY5 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga3Q91XY5 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga3Q91XY5 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga3Q91XY5 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga3Q91XY5 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga3Q91XY5 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga3Q91XY5 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga3Q91XY5 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga3Q91XY5 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.05□□□□□ -0.16
Pcdhga3Q91XY5 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
Pcdhga3Q91XY5 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga3Q91XY5 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhga3Q91XY5 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga3Q91XY5 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga3Q91XY5 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga3Q91XY5 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga3Q91XY5 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga3Q91XY5 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga3Q91XY5 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga3Q91XY5 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Pcdhga3Q91XY5 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms