Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx41Q91VN6 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx41Q91VN6 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx41Q91VN6 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx41Q91VN6 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.04■□□□□ 0.48
Ddx41Q91VN6 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx41Q91VN6 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx41Q91VN6 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx41Q91VN6 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx41Q91VN6 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ddx41Q91VN6 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.04■□□□□ 0.48
Ddx41Q91VN6 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx41Q91VN6 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx41Q91VN6 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx41Q91VN6 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx41Q91VN6 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
Ddx41Q91VN6 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx41Q91VN6 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx41Q91VN6 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Ddx41Q91VN6 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx41Q91VN6 Mir5131-201ENSMUST00000175426 93 ntBASIC18.03■□□□□ 0.48
Ddx41Q91VN6 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.03■□□□□ 0.48
Ddx41Q91VN6 Gm10060-201ENSMUST00000212002 111 ntBASIC18.03■□□□□ 0.48
Ddx41Q91VN6 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx41Q91VN6 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx41Q91VN6 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Ddx41Q91VN6 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Ddx41Q91VN6 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx41Q91VN6 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx41Q91VN6 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx41Q91VN6 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx41Q91VN6 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx41Q91VN6 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx41Q91VN6 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Ddx41Q91VN6 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx41Q91VN6 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx41Q91VN6 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx41Q91VN6 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx41Q91VN6 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx41Q91VN6 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx41Q91VN6 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.02■□□□□ 0.48
Ddx41Q91VN6 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.02■□□□□ 0.48
Ddx41Q91VN6 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Ddx41Q91VN6 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx41Q91VN6 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx41Q91VN6 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.02■□□□□ 0.48
Ddx41Q91VN6 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx41Q91VN6 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.02■□□□□ 0.47
Ddx41Q91VN6 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ddx41Q91VN6 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx41Q91VN6 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx41Q91VN6 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx41Q91VN6 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Ddx41Q91VN6 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Ddx41Q91VN6 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx41Q91VN6 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx41Q91VN6 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx41Q91VN6 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx41Q91VN6 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.01■□□□□ 0.47
Ddx41Q91VN6 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Ddx41Q91VN6 Gm27525-201ENSMUST00000184465 107 ntBASIC18.01■□□□□ 0.47
Ddx41Q91VN6 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.01■□□□□ 0.47
Ddx41Q91VN6 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.01■□□□□ 0.47
Ddx41Q91VN6 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.01■□□□□ 0.47
Ddx41Q91VN6 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.01■□□□□ 0.47
Ddx41Q91VN6 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx41Q91VN6 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.01■□□□□ 0.47
Ddx41Q91VN6 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx41Q91VN6 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
Ddx41Q91VN6 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx41Q91VN6 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
Ddx41Q91VN6 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx41Q91VN6 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx41Q91VN6 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx41Q91VN6 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx41Q91VN6 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx41Q91VN6 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx41Q91VN6 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx41Q91VN6 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ddx41Q91VN6 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ddx41Q91VN6 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx41Q91VN6 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx41Q91VN6 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx41Q91VN6 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx41Q91VN6 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx41Q91VN6 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx41Q91VN6 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx41Q91VN6 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx41Q91VN6 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx41Q91VN6 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx41Q91VN6 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx41Q91VN6 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx41Q91VN6 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18■□□□□ 0.47
Ddx41Q91VN6 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18■□□□□ 0.47
Ddx41Q91VN6 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx41Q91VN6 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx41Q91VN6 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx41Q91VN6 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC18■□□□□ 0.47
Ddx41Q91VN6 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Ddx41Q91VN6 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms