Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.39■□□□□ 0.21
Pcdhb17Q91VD8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb17Q91VD8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb17Q91VD8 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb17Q91VD8 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb17Q91VD8 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb17Q91VD8 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.39■□□□□ 0.21
Pcdhb17Q91VD8 Gm8502-201ENSMUST00000185708 901 ntBASIC16.39■□□□□ 0.21
Pcdhb17Q91VD8 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.39■□□□□ 0.21
Pcdhb17Q91VD8 Gm8510-201ENSMUST00000189202 895 ntBASIC16.39■□□□□ 0.21
Pcdhb17Q91VD8 Gm2316-201ENSMUST00000190613 921 ntBASIC16.39■□□□□ 0.21
Pcdhb17Q91VD8 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdhb17Q91VD8 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.39■□□□□ 0.21
Pcdhb17Q91VD8 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb17Q91VD8 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Pcdhb17Q91VD8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb17Q91VD8 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb17Q91VD8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb17Q91VD8 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb17Q91VD8 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb17Q91VD8 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb17Q91VD8 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb17Q91VD8 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb17Q91VD8 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhb17Q91VD8 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb17Q91VD8 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb17Q91VD8 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb17Q91VD8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Gm8312-201ENSMUST00000119380 618 ntBASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Gm26736-201ENSMUST00000180425 1236 ntBASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Gm8825-201ENSMUST00000182565 998 ntBASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Gm4518-201ENSMUST00000182638 718 ntBASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Gm43084-201ENSMUST00000200696 947 ntBASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 AC173345.3-201ENSMUST00000221245 1093 ntBASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb17Q91VD8 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb17Q91VD8 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhb17Q91VD8 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb17Q91VD8 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb17Q91VD8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb17Q91VD8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb17Q91VD8 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb17Q91VD8 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.37■□□□□ 0.21
Pcdhb17Q91VD8 Gm37017-201ENSMUST00000195266 747 ntBASIC16.37■□□□□ 0.21
Pcdhb17Q91VD8 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.37■□□□□ 0.21
Pcdhb17Q91VD8 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.37■□□□□ 0.21
Pcdhb17Q91VD8 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.37■□□□□ 0.21
Pcdhb17Q91VD8 CT025525.2-201ENSMUST00000227743 423 ntBASIC16.37■□□□□ 0.21
Pcdhb17Q91VD8 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb17Q91VD8 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
Pcdhb17Q91VD8 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb17Q91VD8 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb17Q91VD8 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms