Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.9■□□□□ 0.14
Rpa1Q8VEE4 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.9■□□□□ 0.14
Rpa1Q8VEE4 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rpa1Q8VEE4 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rpa1Q8VEE4 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rpa1Q8VEE4 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rpa1Q8VEE4 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.9■□□□□ 0.14
Rpa1Q8VEE4 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rpa1Q8VEE4 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
Rpa1Q8VEE4 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.89■□□□□ 0.13
Rpa1Q8VEE4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rpa1Q8VEE4 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rpa1Q8VEE4 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rpa1Q8VEE4 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rpa1Q8VEE4 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.89■□□□□ 0.13
Rpa1Q8VEE4 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Rpa1Q8VEE4 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rpa1Q8VEE4 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rpa1Q8VEE4 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rpa1Q8VEE4 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rpa1Q8VEE4 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rpa1Q8VEE4 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rpa1Q8VEE4 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rpa1Q8VEE4 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.89■□□□□ 0.13
Rpa1Q8VEE4 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rpa1Q8VEE4 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.89■□□□□ 0.13
Rpa1Q8VEE4 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.89■□□□□ 0.13
Rpa1Q8VEE4 Timm23-208ENSMUST00000226683 750 ntBASIC15.89■□□□□ 0.13
Rpa1Q8VEE4 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Rpa1Q8VEE4 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rpa1Q8VEE4 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rpa1Q8VEE4 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rpa1Q8VEE4 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rpa1Q8VEE4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Rpa1Q8VEE4 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rpa1Q8VEE4 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rpa1Q8VEE4 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rpa1Q8VEE4 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rpa1Q8VEE4 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rpa1Q8VEE4 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rpa1Q8VEE4 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rpa1Q8VEE4 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rpa1Q8VEE4 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.88■□□□□ 0.13
Rpa1Q8VEE4 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Rpa1Q8VEE4 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rpa1Q8VEE4 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Rpa1Q8VEE4 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rpa1Q8VEE4 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.88■□□□□ 0.13
Rpa1Q8VEE4 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Rpa1Q8VEE4 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.88■□□□□ 0.13
Rpa1Q8VEE4 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.88■□□□□ 0.13
Rpa1Q8VEE4 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rpa1Q8VEE4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rpa1Q8VEE4 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.88■□□□□ 0.13
Rpa1Q8VEE4 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rpa1Q8VEE4 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.88■□□□□ 0.13
Rpa1Q8VEE4 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rpa1Q8VEE4 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rpa1Q8VEE4 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rpa1Q8VEE4 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rpa1Q8VEE4 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rpa1Q8VEE4 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rpa1Q8VEE4 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.87■□□□□ 0.13
Rpa1Q8VEE4 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rpa1Q8VEE4 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Rpa1Q8VEE4 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Rpa1Q8VEE4 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpa1Q8VEE4 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Rpa1Q8VEE4 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpa1Q8VEE4 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpa1Q8VEE4 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpa1Q8VEE4 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpa1Q8VEE4 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpa1Q8VEE4 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpa1Q8VEE4 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Rpa1Q8VEE4 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Rpa1Q8VEE4 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpa1Q8VEE4 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rpa1Q8VEE4 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rpa1Q8VEE4 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpa1Q8VEE4 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpa1Q8VEE4 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Rpa1Q8VEE4 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpa1Q8VEE4 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpa1Q8VEE4 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpa1Q8VEE4 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpa1Q8VEE4 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpa1Q8VEE4 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpa1Q8VEE4 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Rpa1Q8VEE4 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpa1Q8VEE4 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.87■□□□□ 0.13
Rpa1Q8VEE4 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rpa1Q8VEE4 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Rpa1Q8VEE4 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Rpa1Q8VEE4 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rpa1Q8VEE4 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms