Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Top1mtQ8R4U6 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Top1mtQ8R4U6 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Top1mtQ8R4U6 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.84■□□□□ 0.61
Top1mtQ8R4U6 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Top1mtQ8R4U6 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Top1mtQ8R4U6 Ank2-226ENSMUST00000189368 339 ntBASIC18.84■□□□□ 0.61
Top1mtQ8R4U6 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.84■□□□□ 0.61
Top1mtQ8R4U6 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Top1mtQ8R4U6 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Top1mtQ8R4U6 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Top1mtQ8R4U6 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Top1mtQ8R4U6 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Top1mtQ8R4U6 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Top1mtQ8R4U6 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Top1mtQ8R4U6 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Top1mtQ8R4U6 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Top1mtQ8R4U6 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Top1mtQ8R4U6 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Top1mtQ8R4U6 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Top1mtQ8R4U6 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Top1mtQ8R4U6 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Top1mtQ8R4U6 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Top1mtQ8R4U6 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Top1mtQ8R4U6 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Top1mtQ8R4U6 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Top1mtQ8R4U6 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Top1mtQ8R4U6 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Top1mtQ8R4U6 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.83■□□□□ 0.6
Top1mtQ8R4U6 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.83■□□□□ 0.6
Top1mtQ8R4U6 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Top1mtQ8R4U6 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Top1mtQ8R4U6 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Top1mtQ8R4U6 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Top1mtQ8R4U6 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Top1mtQ8R4U6 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Top1mtQ8R4U6 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Top1mtQ8R4U6 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Top1mtQ8R4U6 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Top1mtQ8R4U6 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Top1mtQ8R4U6 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Top1mtQ8R4U6 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Top1mtQ8R4U6 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Top1mtQ8R4U6 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.82■□□□□ 0.6
Top1mtQ8R4U6 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.82■□□□□ 0.6
Top1mtQ8R4U6 Gm21362-201ENSMUST00000194272 928 ntBASIC18.82■□□□□ 0.6
Top1mtQ8R4U6 Gm18669-201ENSMUST00000216049 778 ntBASIC18.82■□□□□ 0.6
Top1mtQ8R4U6 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.82■□□□□ 0.6
Top1mtQ8R4U6 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Top1mtQ8R4U6 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Top1mtQ8R4U6 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Top1mtQ8R4U6 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Top1mtQ8R4U6 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Top1mtQ8R4U6 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Top1mtQ8R4U6 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Top1mtQ8R4U6 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Top1mtQ8R4U6 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Top1mtQ8R4U6 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Top1mtQ8R4U6 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Top1mtQ8R4U6 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Top1mtQ8R4U6 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Top1mtQ8R4U6 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Top1mtQ8R4U6 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Top1mtQ8R4U6 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Top1mtQ8R4U6 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Top1mtQ8R4U6 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.81■□□□□ 0.6
Top1mtQ8R4U6 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Top1mtQ8R4U6 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.81■□□□□ 0.6
Top1mtQ8R4U6 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Top1mtQ8R4U6 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.81■□□□□ 0.6
Top1mtQ8R4U6 Gm7506-201ENSMUST00000207758 815 ntBASIC18.81■□□□□ 0.6
Top1mtQ8R4U6 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.81■□□□□ 0.6
Top1mtQ8R4U6 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Top1mtQ8R4U6 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Top1mtQ8R4U6 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Top1mtQ8R4U6 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Top1mtQ8R4U6 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Top1mtQ8R4U6 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Top1mtQ8R4U6 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Top1mtQ8R4U6 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.81■□□□□ 0.6
Top1mtQ8R4U6 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Top1mtQ8R4U6 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Top1mtQ8R4U6 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Top1mtQ8R4U6 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.8■□□□□ 0.6
Top1mtQ8R4U6 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Top1mtQ8R4U6 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Top1mtQ8R4U6 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Top1mtQ8R4U6 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Top1mtQ8R4U6 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Top1mtQ8R4U6 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Top1mtQ8R4U6 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.8■□□□□ 0.6
Top1mtQ8R4U6 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Top1mtQ8R4U6 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Top1mtQ8R4U6 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.8■□□□□ 0.6
Top1mtQ8R4U6 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Top1mtQ8R4U6 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Top1mtQ8R4U6 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.8■□□□□ 0.6
Top1mtQ8R4U6 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Top1mtQ8R4U6 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Top1mtQ8R4U6 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms