Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Zcchc9Q8R1J3 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Zcchc9Q8R1J3 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Zcchc9Q8R1J3 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.7■□□□□ 0.1
Zcchc9Q8R1J3 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Zcchc9Q8R1J3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Zcchc9Q8R1J3 Gm7222-201ENSMUST00000117512 906 ntBASIC15.7■□□□□ 0.1
Zcchc9Q8R1J3 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Zcchc9Q8R1J3 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.7■□□□□ 0.1
Zcchc9Q8R1J3 Gm27628-201ENSMUST00000184911 107 ntBASIC15.7■□□□□ 0.1
Zcchc9Q8R1J3 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.7■□□□□ 0.1
Zcchc9Q8R1J3 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.7■□□□□ 0.1
Zcchc9Q8R1J3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Zcchc9Q8R1J3 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Zcchc9Q8R1J3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Zcchc9Q8R1J3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Zcchc9Q8R1J3 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Zcchc9Q8R1J3 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Zcchc9Q8R1J3 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.7■□□□□ 0.1
Zcchc9Q8R1J3 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Zcchc9Q8R1J3 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Zcchc9Q8R1J3 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Zcchc9Q8R1J3 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Zcchc9Q8R1J3 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Zcchc9Q8R1J3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Zcchc9Q8R1J3 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Zcchc9Q8R1J3 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Zcchc9Q8R1J3 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Zcchc9Q8R1J3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Zcchc9Q8R1J3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Zcchc9Q8R1J3 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Zcchc9Q8R1J3 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Zcchc9Q8R1J3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Zcchc9Q8R1J3 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Zcchc9Q8R1J3 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Zcchc9Q8R1J3 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Zcchc9Q8R1J3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.69■□□□□ 0.1
Zcchc9Q8R1J3 Gm25406-201ENSMUST00000157599 105 ntBASIC15.69■□□□□ 0.1
Zcchc9Q8R1J3 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Zcchc9Q8R1J3 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Zcchc9Q8R1J3 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Zcchc9Q8R1J3 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Zcchc9Q8R1J3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Zcchc9Q8R1J3 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Zcchc9Q8R1J3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Zcchc9Q8R1J3 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Zcchc9Q8R1J3 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Zcchc9Q8R1J3 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Zcchc9Q8R1J3 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 Gm14822-201ENSMUST00000122247 291 ntBASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Zcchc9Q8R1J3 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Zcchc9Q8R1J3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Zcchc9Q8R1J3 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Zcchc9Q8R1J3 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Zcchc9Q8R1J3 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Zcchc9Q8R1J3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Zcchc9Q8R1J3 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.67■□□□□ 0.1
Zcchc9Q8R1J3 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Zcchc9Q8R1J3 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Zcchc9Q8R1J3 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Zcchc9Q8R1J3 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Zcchc9Q8R1J3 Gm4995-201ENSMUST00000117247 432 ntBASIC15.67■□□□□ 0.1
Zcchc9Q8R1J3 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.67■□□□□ 0.1
Zcchc9Q8R1J3 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.67■□□□□ 0.1
Zcchc9Q8R1J3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Zcchc9Q8R1J3 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Zcchc9Q8R1J3 Gm9727-201ENSMUST00000161387 555 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms