Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sf3a1Q8K4Z5 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sf3a1Q8K4Z5 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sf3a1Q8K4Z5 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sf3a1Q8K4Z5 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC19.27■□□□□ 0.67
Sf3a1Q8K4Z5 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sf3a1Q8K4Z5 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3a1Q8K4Z5 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Sf3a1Q8K4Z5 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3a1Q8K4Z5 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3a1Q8K4Z5 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3a1Q8K4Z5 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3a1Q8K4Z5 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Sf3a1Q8K4Z5 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3a1Q8K4Z5 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3a1Q8K4Z5 Rbfox2-207ENSMUST00000227533 1041 ntBASIC19.26■□□□□ 0.67
Sf3a1Q8K4Z5 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Sf3a1Q8K4Z5 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC19.26■□□□□ 0.67
Sf3a1Q8K4Z5 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Sf3a1Q8K4Z5 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3a1Q8K4Z5 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Sf3a1Q8K4Z5 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3a1Q8K4Z5 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3a1Q8K4Z5 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3a1Q8K4Z5 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Sf3a1Q8K4Z5 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3a1Q8K4Z5 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3a1Q8K4Z5 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3a1Q8K4Z5 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3a1Q8K4Z5 CT010478.1-201ENSMUST00000220747 2787 ntBASIC19.26■□□□□ 0.67
Sf3a1Q8K4Z5 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sf3a1Q8K4Z5 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3a1Q8K4Z5 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC19.25■□□□□ 0.67
Sf3a1Q8K4Z5 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3a1Q8K4Z5 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3a1Q8K4Z5 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3a1Q8K4Z5 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3a1Q8K4Z5 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3a1Q8K4Z5 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC19.25■□□□□ 0.67
Sf3a1Q8K4Z5 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.25■□□□□ 0.67
Sf3a1Q8K4Z5 Gm8655-201ENSMUST00000221159 852 ntBASIC19.25■□□□□ 0.67
Sf3a1Q8K4Z5 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Sf3a1Q8K4Z5 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3a1Q8K4Z5 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3a1Q8K4Z5 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3a1Q8K4Z5 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Sf3a1Q8K4Z5 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3a1Q8K4Z5 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3a1Q8K4Z5 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3a1Q8K4Z5 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Sf3a1Q8K4Z5 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3a1Q8K4Z5 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3a1Q8K4Z5 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sf3a1Q8K4Z5 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3a1Q8K4Z5 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3a1Q8K4Z5 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.24■□□□□ 0.67
Sf3a1Q8K4Z5 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC19.24■□□□□ 0.67
Sf3a1Q8K4Z5 Gm44357-201ENSMUST00000195897 142 ntBASIC19.24■□□□□ 0.67
Sf3a1Q8K4Z5 Gm19658-201ENSMUST00000196231 138 ntBASIC19.24■□□□□ 0.67
Sf3a1Q8K4Z5 Gm44367-201ENSMUST00000196836 138 ntBASIC19.24■□□□□ 0.67
Sf3a1Q8K4Z5 Gm44350-201ENSMUST00000197197 138 ntBASIC19.24■□□□□ 0.67
Sf3a1Q8K4Z5 Gm44390-201ENSMUST00000197533 144 ntBASIC19.24■□□□□ 0.67
Sf3a1Q8K4Z5 Gm44313-201ENSMUST00000198018 138 ntBASIC19.24■□□□□ 0.67
Sf3a1Q8K4Z5 Gm44486-201ENSMUST00000198508 138 ntBASIC19.24■□□□□ 0.67
Sf3a1Q8K4Z5 Gm44314-201ENSMUST00000199263 138 ntBASIC19.24■□□□□ 0.67
Sf3a1Q8K4Z5 Gm44394-201ENSMUST00000199558 138 ntBASIC19.24■□□□□ 0.67
Sf3a1Q8K4Z5 Gm44484-201ENSMUST00000199873 138 ntBASIC19.24■□□□□ 0.67
Sf3a1Q8K4Z5 Gm44466-201ENSMUST00000200264 138 ntBASIC19.24■□□□□ 0.67
Sf3a1Q8K4Z5 Gm44359-201ENSMUST00000200671 138 ntBASIC19.24■□□□□ 0.67
Sf3a1Q8K4Z5 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3a1Q8K4Z5 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3a1Q8K4Z5 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3a1Q8K4Z5 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3a1Q8K4Z5 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3a1Q8K4Z5 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3a1Q8K4Z5 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sf3a1Q8K4Z5 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
Sf3a1Q8K4Z5 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3a1Q8K4Z5 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3a1Q8K4Z5 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Sf3a1Q8K4Z5 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3a1Q8K4Z5 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3a1Q8K4Z5 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3a1Q8K4Z5 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Sf3a1Q8K4Z5 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Sf3a1Q8K4Z5 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3a1Q8K4Z5 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3a1Q8K4Z5 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Sf3a1Q8K4Z5 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3a1Q8K4Z5 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC19.23■□□□□ 0.67
Sf3a1Q8K4Z5 Gm18622-201ENSMUST00000219361 595 ntBASIC19.23■□□□□ 0.67
Sf3a1Q8K4Z5 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3a1Q8K4Z5 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3a1Q8K4Z5 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3a1Q8K4Z5 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Sf3a1Q8K4Z5 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3a1Q8K4Z5 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sf3a1Q8K4Z5 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Sf3a1Q8K4Z5 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3a1Q8K4Z5 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms