Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.64■□□□□ 0.57
Cchcr1Q8K2I2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Cchcr1Q8K2I2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.64■□□□□ 0.57
Cchcr1Q8K2I2 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Cchcr1Q8K2I2 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cchcr1Q8K2I2 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cchcr1Q8K2I2 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cchcr1Q8K2I2 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cchcr1Q8K2I2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cchcr1Q8K2I2 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.64■□□□□ 0.57
Cchcr1Q8K2I2 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC18.64■□□□□ 0.57
Cchcr1Q8K2I2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cchcr1Q8K2I2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cchcr1Q8K2I2 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cchcr1Q8K2I2 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cchcr1Q8K2I2 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cchcr1Q8K2I2 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Cchcr1Q8K2I2 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Cchcr1Q8K2I2 Gm15794-201ENSMUST00000120182 631 ntBASIC18.63■□□□□ 0.57
Cchcr1Q8K2I2 Gm23634-201ENSMUST00000175071 91 ntBASIC18.63■□□□□ 0.57
Cchcr1Q8K2I2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.63■□□□□ 0.57
Cchcr1Q8K2I2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cchcr1Q8K2I2 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Cchcr1Q8K2I2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Cchcr1Q8K2I2 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cchcr1Q8K2I2 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.63■□□□□ 0.57
Cchcr1Q8K2I2 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Cchcr1Q8K2I2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cchcr1Q8K2I2 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cchcr1Q8K2I2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cchcr1Q8K2I2 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cchcr1Q8K2I2 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cchcr1Q8K2I2 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cchcr1Q8K2I2 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cchcr1Q8K2I2 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cchcr1Q8K2I2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cchcr1Q8K2I2 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Cchcr1Q8K2I2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cchcr1Q8K2I2 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cchcr1Q8K2I2 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cchcr1Q8K2I2 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cchcr1Q8K2I2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cchcr1Q8K2I2 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cchcr1Q8K2I2 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cchcr1Q8K2I2 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cchcr1Q8K2I2 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cchcr1Q8K2I2 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Cchcr1Q8K2I2 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cchcr1Q8K2I2 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Cchcr1Q8K2I2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cchcr1Q8K2I2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cchcr1Q8K2I2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cchcr1Q8K2I2 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cchcr1Q8K2I2 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cchcr1Q8K2I2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cchcr1Q8K2I2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Cchcr1Q8K2I2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cchcr1Q8K2I2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cchcr1Q8K2I2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cchcr1Q8K2I2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cchcr1Q8K2I2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cchcr1Q8K2I2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Cchcr1Q8K2I2 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cchcr1Q8K2I2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cchcr1Q8K2I2 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Cchcr1Q8K2I2 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Cchcr1Q8K2I2 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Cchcr1Q8K2I2 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cchcr1Q8K2I2 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cchcr1Q8K2I2 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cchcr1Q8K2I2 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cchcr1Q8K2I2 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC18.6■□□□□ 0.57
Cchcr1Q8K2I2 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Cchcr1Q8K2I2 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cchcr1Q8K2I2 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cchcr1Q8K2I2 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Cchcr1Q8K2I2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cchcr1Q8K2I2 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cchcr1Q8K2I2 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cchcr1Q8K2I2 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cchcr1Q8K2I2 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cchcr1Q8K2I2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cchcr1Q8K2I2 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cchcr1Q8K2I2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cchcr1Q8K2I2 AA414768-201ENSMUST00000121924 1257 ntBASIC18.6■□□□□ 0.57
Cchcr1Q8K2I2 Gm25406-201ENSMUST00000157599 105 ntBASIC18.6■□□□□ 0.57
Cchcr1Q8K2I2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Cchcr1Q8K2I2 Gm6659-201ENSMUST00000174752 547 ntBASIC18.6■□□□□ 0.57
Cchcr1Q8K2I2 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.6■□□□□ 0.57
Cchcr1Q8K2I2 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cchcr1Q8K2I2 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cchcr1Q8K2I2 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cchcr1Q8K2I2 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cchcr1Q8K2I2 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cchcr1Q8K2I2 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cchcr1Q8K2I2 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cchcr1Q8K2I2 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cchcr1Q8K2I2 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cchcr1Q8K2I2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cchcr1Q8K2I2 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms