Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Rfwd3Q8CIK8 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfwd3Q8CIK8 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfwd3Q8CIK8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfwd3Q8CIK8 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Rfwd3Q8CIK8 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.83□□□□□ -0.04
Rfwd3Q8CIK8 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfwd3Q8CIK8 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.83□□□□□ -0.04
Rfwd3Q8CIK8 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Rfwd3Q8CIK8 Gm15165-201ENSMUST00000118140 502 ntBASIC14.83□□□□□ -0.04
Rfwd3Q8CIK8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.83□□□□□ -0.04
Rfwd3Q8CIK8 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.83□□□□□ -0.04
Rfwd3Q8CIK8 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.83□□□□□ -0.04
Rfwd3Q8CIK8 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Rfwd3Q8CIK8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Rfwd3Q8CIK8 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Rfwd3Q8CIK8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.83□□□□□ -0.04
Rfwd3Q8CIK8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfwd3Q8CIK8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfwd3Q8CIK8 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfwd3Q8CIK8 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfwd3Q8CIK8 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.82□□□□□ -0.04
Rfwd3Q8CIK8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfwd3Q8CIK8 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Rfwd3Q8CIK8 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.82□□□□□ -0.04
Rfwd3Q8CIK8 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Rfwd3Q8CIK8 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Rfwd3Q8CIK8 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.82□□□□□ -0.04
Rfwd3Q8CIK8 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.82□□□□□ -0.04
Rfwd3Q8CIK8 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfwd3Q8CIK8 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rfwd3Q8CIK8 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.82□□□□□ -0.04
Rfwd3Q8CIK8 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfwd3Q8CIK8 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rfwd3Q8CIK8 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfwd3Q8CIK8 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfwd3Q8CIK8 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfwd3Q8CIK8 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfwd3Q8CIK8 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfwd3Q8CIK8 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfwd3Q8CIK8 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rfwd3Q8CIK8 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.81□□□□□ -0.04
Rfwd3Q8CIK8 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Rfwd3Q8CIK8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfwd3Q8CIK8 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfwd3Q8CIK8 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfwd3Q8CIK8 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfwd3Q8CIK8 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Rfwd3Q8CIK8 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rfwd3Q8CIK8 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfwd3Q8CIK8 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfwd3Q8CIK8 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.81□□□□□ -0.04
Rfwd3Q8CIK8 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.81□□□□□ -0.04
Rfwd3Q8CIK8 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.81□□□□□ -0.04
Rfwd3Q8CIK8 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rfwd3Q8CIK8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.81□□□□□ -0.04
Rfwd3Q8CIK8 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfwd3Q8CIK8 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Rfwd3Q8CIK8 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rfwd3Q8CIK8 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfwd3Q8CIK8 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfwd3Q8CIK8 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Rfwd3Q8CIK8 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rfwd3Q8CIK8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.81□□□□□ -0.04
Rfwd3Q8CIK8 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfwd3Q8CIK8 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rfwd3Q8CIK8 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rfwd3Q8CIK8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfwd3Q8CIK8 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.81□□□□□ -0.04
Rfwd3Q8CIK8 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rfwd3Q8CIK8 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.8□□□□□ -0.04
Rfwd3Q8CIK8 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfwd3Q8CIK8 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfwd3Q8CIK8 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfwd3Q8CIK8 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.8□□□□□ -0.04
Rfwd3Q8CIK8 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Rfwd3Q8CIK8 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Rfwd3Q8CIK8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfwd3Q8CIK8 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfwd3Q8CIK8 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rfwd3Q8CIK8 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfwd3Q8CIK8 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.8□□□□□ -0.04
Rfwd3Q8CIK8 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfwd3Q8CIK8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfwd3Q8CIK8 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rfwd3Q8CIK8 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfwd3Q8CIK8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfwd3Q8CIK8 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Rfwd3Q8CIK8 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfwd3Q8CIK8 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfwd3Q8CIK8 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfwd3Q8CIK8 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfwd3Q8CIK8 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Rfwd3Q8CIK8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfwd3Q8CIK8 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfwd3Q8CIK8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.79□□□□□ -0.04
Rfwd3Q8CIK8 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfwd3Q8CIK8 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.79□□□□□ -0.04
Rfwd3Q8CIK8 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfwd3Q8CIK8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms