Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhb7Q8CDY9 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhb7Q8CDY9 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Pcdhb7Q8CDY9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
Pcdhb7Q8CDY9 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb7Q8CDY9 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb7Q8CDY9 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.86■□□□□ 0.13
Pcdhb7Q8CDY9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb7Q8CDY9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb7Q8CDY9 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.86■□□□□ 0.13
Pcdhb7Q8CDY9 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb7Q8CDY9 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb7Q8CDY9 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Pcdhb7Q8CDY9 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb7Q8CDY9 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.86■□□□□ 0.13
Pcdhb7Q8CDY9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb7Q8CDY9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb7Q8CDY9 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb7Q8CDY9 Sybu-209ENSMUST00000228639 4113 ntBASIC15.85■□□□□ 0.13
Pcdhb7Q8CDY9 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb7Q8CDY9 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb7Q8CDY9 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb7Q8CDY9 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.85■□□□□ 0.13
Pcdhb7Q8CDY9 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb7Q8CDY9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.85■□□□□ 0.13
Pcdhb7Q8CDY9 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb7Q8CDY9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb7Q8CDY9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb7Q8CDY9 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb7Q8CDY9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Pcdhb7Q8CDY9 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb7Q8CDY9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb7Q8CDY9 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb7Q8CDY9 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb7Q8CDY9 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb7Q8CDY9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb7Q8CDY9 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb7Q8CDY9 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb7Q8CDY9 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb7Q8CDY9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb7Q8CDY9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Pcdhb7Q8CDY9 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb7Q8CDY9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.84■□□□□ 0.13
Pcdhb7Q8CDY9 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb7Q8CDY9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb7Q8CDY9 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb7Q8CDY9 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb7Q8CDY9 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.84■□□□□ 0.13
Pcdhb7Q8CDY9 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb7Q8CDY9 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb7Q8CDY9 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Pcdhb7Q8CDY9 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb7Q8CDY9 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb7Q8CDY9 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb7Q8CDY9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb7Q8CDY9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb7Q8CDY9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb7Q8CDY9 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.84■□□□□ 0.13
Pcdhb7Q8CDY9 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb7Q8CDY9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb7Q8CDY9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb7Q8CDY9 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb7Q8CDY9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb7Q8CDY9 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb7Q8CDY9 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb7Q8CDY9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhb7Q8CDY9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhb7Q8CDY9 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhb7Q8CDY9 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.83■□□□□ 0.13
Pcdhb7Q8CDY9 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.83■□□□□ 0.13
Pcdhb7Q8CDY9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhb7Q8CDY9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhb7Q8CDY9 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhb7Q8CDY9 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhb7Q8CDY9 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.13
Pcdhb7Q8CDY9 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.83■□□□□ 0.13
Pcdhb7Q8CDY9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Pcdhb7Q8CDY9 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb7Q8CDY9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb7Q8CDY9 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb7Q8CDY9 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
Pcdhb7Q8CDY9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb7Q8CDY9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb7Q8CDY9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.83■□□□□ 0.12
Pcdhb7Q8CDY9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb7Q8CDY9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Pcdhb7Q8CDY9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.83■□□□□ 0.12
Pcdhb7Q8CDY9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb7Q8CDY9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb7Q8CDY9 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb7Q8CDY9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb7Q8CDY9 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.83■□□□□ 0.12
Pcdhb7Q8CDY9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb7Q8CDY9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Pcdhb7Q8CDY9 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb7Q8CDY9 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb7Q8CDY9 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb7Q8CDY9 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb7Q8CDY9 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb7Q8CDY9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms