Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC24.14■■□□□ 1.45
Pabpn1Q8CCS6 Gm8062-201ENSMUST00000139696 444 ntBASIC24.14■■□□□ 1.45
Pabpn1Q8CCS6 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Pabpn1Q8CCS6 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Pabpn1Q8CCS6 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC24.14■■□□□ 1.45
Pabpn1Q8CCS6 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC24.14■■□□□ 1.45
Pabpn1Q8CCS6 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC24.14■■□□□ 1.45
Pabpn1Q8CCS6 AC090659.2-201ENSMUST00000225378 1186 ntBASIC24.14■■□□□ 1.45
Pabpn1Q8CCS6 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Pabpn1Q8CCS6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Pabpn1Q8CCS6 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
Pabpn1Q8CCS6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Pabpn1Q8CCS6 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Pabpn1Q8CCS6 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Pabpn1Q8CCS6 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Pabpn1Q8CCS6 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
Pabpn1Q8CCS6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pabpn1Q8CCS6 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC24.13■■□□□ 1.45
Pabpn1Q8CCS6 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Pabpn1Q8CCS6 Gm17420-201ENSMUST00000164753 153 ntBASIC24.13■■□□□ 1.45
Pabpn1Q8CCS6 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Pabpn1Q8CCS6 Ighv8-7-201ENSMUST00000194349 297 ntBASIC24.13■■□□□ 1.45
Pabpn1Q8CCS6 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Pabpn1Q8CCS6 Gm43179-201ENSMUST00000198797 275 ntBASIC24.13■■□□□ 1.45
Pabpn1Q8CCS6 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Pabpn1Q8CCS6 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pabpn1Q8CCS6 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
Pabpn1Q8CCS6 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pabpn1Q8CCS6 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Pabpn1Q8CCS6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pabpn1Q8CCS6 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pabpn1Q8CCS6 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pabpn1Q8CCS6 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pabpn1Q8CCS6 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Pabpn1Q8CCS6 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pabpn1Q8CCS6 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
Pabpn1Q8CCS6 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pabpn1Q8CCS6 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pabpn1Q8CCS6 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pabpn1Q8CCS6 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pabpn1Q8CCS6 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pabpn1Q8CCS6 Gm10766-202ENSMUST00000194123 606 ntBASIC24.12■■□□□ 1.45
Pabpn1Q8CCS6 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Pabpn1Q8CCS6 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pabpn1Q8CCS6 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pabpn1Q8CCS6 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC24.12■■□□□ 1.45
Pabpn1Q8CCS6 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Pabpn1Q8CCS6 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pabpn1Q8CCS6 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pabpn1Q8CCS6 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Pabpn1Q8CCS6 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC24.11■■□□□ 1.45
Pabpn1Q8CCS6 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
Pabpn1Q8CCS6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pabpn1Q8CCS6 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Pabpn1Q8CCS6 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Pabpn1Q8CCS6 Gm12390-201ENSMUST00000117897 397 ntBASIC24.11■■□□□ 1.45
Pabpn1Q8CCS6 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
Pabpn1Q8CCS6 AC162801.1-201ENSMUST00000220612 198 ntBASIC24.11■■□□□ 1.45
Pabpn1Q8CCS6 Gm42853-201ENSMUST00000201273 1387 ntBASIC24.11■■□□□ 1.45
Pabpn1Q8CCS6 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pabpn1Q8CCS6 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pabpn1Q8CCS6 Gm8835-201ENSMUST00000173096 1169 ntBASIC24.1■■□□□ 1.45
Pabpn1Q8CCS6 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
Pabpn1Q8CCS6 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC24.1■■□□□ 1.45
Pabpn1Q8CCS6 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC24.1■■□□□ 1.45
Pabpn1Q8CCS6 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC24.1■■□□□ 1.45
Pabpn1Q8CCS6 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC24.1■■□□□ 1.45
Pabpn1Q8CCS6 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
Pabpn1Q8CCS6 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pabpn1Q8CCS6 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pabpn1Q8CCS6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pabpn1Q8CCS6 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Pabpn1Q8CCS6 Gm11661-201ENSMUST00000121761 1327 ntBASIC24.1■■□□□ 1.45
Pabpn1Q8CCS6 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Pabpn1Q8CCS6 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Pabpn1Q8CCS6 Gm5303-201ENSMUST00000117943 1252 ntBASIC24.09■■□□□ 1.45
Pabpn1Q8CCS6 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC24.09■■□□□ 1.45
Pabpn1Q8CCS6 Gm37424-201ENSMUST00000191727 561 ntBASIC24.09■■□□□ 1.45
Pabpn1Q8CCS6 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
Pabpn1Q8CCS6 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC24.09■■□□□ 1.45
Pabpn1Q8CCS6 Gm44974-201ENSMUST00000206387 1279 ntBASIC24.09■■□□□ 1.45
Pabpn1Q8CCS6 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Pabpn1Q8CCS6 CT485787.1-201ENSMUST00000225617 968 ntBASIC24.09■■□□□ 1.45
Pabpn1Q8CCS6 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Pabpn1Q8CCS6 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Pabpn1Q8CCS6 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Pabpn1Q8CCS6 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Pabpn1Q8CCS6 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Pabpn1Q8CCS6 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Pabpn1Q8CCS6 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Pabpn1Q8CCS6 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Pabpn1Q8CCS6 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Pabpn1Q8CCS6 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC24.08■■□□□ 1.45
Pabpn1Q8CCS6 Gm10499-201ENSMUST00000174094 934 ntBASIC24.08■■□□□ 1.45
Pabpn1Q8CCS6 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Pabpn1Q8CCS6 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
Pabpn1Q8CCS6 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Pabpn1Q8CCS6 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC24.08■■□□□ 1.45
Pabpn1Q8CCS6 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Pabpn1Q8CCS6 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC24.08■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms