Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ckap4Q8BMK4 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Ckap4Q8BMK4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ckap4Q8BMK4 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.95□□□□□ -0.02
Ckap4Q8BMK4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.95□□□□□ -0.02
Ckap4Q8BMK4 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap4Q8BMK4 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Ckap4Q8BMK4 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap4Q8BMK4 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap4Q8BMK4 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap4Q8BMK4 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap4Q8BMK4 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Ckap4Q8BMK4 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap4Q8BMK4 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap4Q8BMK4 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap4Q8BMK4 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap4Q8BMK4 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap4Q8BMK4 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap4Q8BMK4 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap4Q8BMK4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.95□□□□□ -0.02
Ckap4Q8BMK4 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
Ckap4Q8BMK4 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ckap4Q8BMK4 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ckap4Q8BMK4 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ckap4Q8BMK4 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ckap4Q8BMK4 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ckap4Q8BMK4 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ckap4Q8BMK4 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ckap4Q8BMK4 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ckap4Q8BMK4 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ckap4Q8BMK4 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ckap4Q8BMK4 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ckap4Q8BMK4 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ckap4Q8BMK4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ckap4Q8BMK4 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Ckap4Q8BMK4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ckap4Q8BMK4 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ckap4Q8BMK4 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ckap4Q8BMK4 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ckap4Q8BMK4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Ckap4Q8BMK4 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ckap4Q8BMK4 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ckap4Q8BMK4 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ckap4Q8BMK4 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.93□□□□□ -0.02
Ckap4Q8BMK4 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ckap4Q8BMK4 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Ckap4Q8BMK4 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ckap4Q8BMK4 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ckap4Q8BMK4 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ckap4Q8BMK4 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Ckap4Q8BMK4 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ckap4Q8BMK4 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ckap4Q8BMK4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ckap4Q8BMK4 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.93□□□□□ -0.02
Ckap4Q8BMK4 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Ckap4Q8BMK4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ckap4Q8BMK4 Gm37722-201ENSMUST00000193757 208 ntBASIC14.93□□□□□ -0.02
Ckap4Q8BMK4 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ckap4Q8BMK4 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ckap4Q8BMK4 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Ckap4Q8BMK4 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ckap4Q8BMK4 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ckap4Q8BMK4 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ckap4Q8BMK4 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ckap4Q8BMK4 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ckap4Q8BMK4 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ckap4Q8BMK4 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.93□□□□□ -0.02
Ckap4Q8BMK4 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ckap4Q8BMK4 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.93□□□□□ -0.02
Ckap4Q8BMK4 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ckap4Q8BMK4 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Ckap4Q8BMK4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.93□□□□□ -0.02
Ckap4Q8BMK4 Sybu-209ENSMUST00000228639 4113 ntBASIC14.93□□□□□ -0.02
Ckap4Q8BMK4 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ckap4Q8BMK4 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ckap4Q8BMK4 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ckap4Q8BMK4 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.92□□□□□ -0.02
Ckap4Q8BMK4 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Ckap4Q8BMK4 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ckap4Q8BMK4 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ckap4Q8BMK4 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ckap4Q8BMK4 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ckap4Q8BMK4 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Ckap4Q8BMK4 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ckap4Q8BMK4 Gm9013-201ENSMUST00000132939 882 ntBASIC14.92□□□□□ -0.02
Ckap4Q8BMK4 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.92□□□□□ -0.02
Ckap4Q8BMK4 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ckap4Q8BMK4 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ckap4Q8BMK4 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ckap4Q8BMK4 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ckap4Q8BMK4 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.92□□□□□ -0.02
Ckap4Q8BMK4 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Ckap4Q8BMK4 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ckap4Q8BMK4 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ckap4Q8BMK4 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.92□□□□□ -0.02
Ckap4Q8BMK4 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.92□□□□□ -0.02
Ckap4Q8BMK4 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.92□□□□□ -0.02
Ckap4Q8BMK4 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.92□□□□□ -0.02
Ckap4Q8BMK4 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ckap4Q8BMK4 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms