Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Gm10013-201ENSMUST00000106074 672 ntBASIC15.23■□□□□ 0.03
Rnf38Q8BI21 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf38Q8BI21 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rnf38Q8BI21 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.23■□□□□ 0.03
Rnf38Q8BI21 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.23■□□□□ 0.03
Rnf38Q8BI21 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rnf38Q8BI21 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Rnf38Q8BI21 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf38Q8BI21 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf38Q8BI21 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf38Q8BI21 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf38Q8BI21 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf38Q8BI21 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf38Q8BI21 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rnf38Q8BI21 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rnf38Q8BI21 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf38Q8BI21 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf38Q8BI21 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf38Q8BI21 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rnf38Q8BI21 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.23■□□□□ 0.03
Rnf38Q8BI21 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.22■□□□□ 0.03
Rnf38Q8BI21 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf38Q8BI21 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf38Q8BI21 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Rnf38Q8BI21 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.22■□□□□ 0.03
Rnf38Q8BI21 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.22■□□□□ 0.03
Rnf38Q8BI21 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf38Q8BI21 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf38Q8BI21 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Rnf38Q8BI21 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.22■□□□□ 0.03
Rnf38Q8BI21 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf38Q8BI21 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf38Q8BI21 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf38Q8BI21 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf38Q8BI21 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf38Q8BI21 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf38Q8BI21 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf38Q8BI21 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rnf38Q8BI21 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.22■□□□□ 0.03
Rnf38Q8BI21 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rnf38Q8BI21 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf38Q8BI21 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf38Q8BI21 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf38Q8BI21 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf38Q8BI21 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf38Q8BI21 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf38Q8BI21 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf38Q8BI21 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf38Q8BI21 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf38Q8BI21 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf38Q8BI21 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.21■□□□□ 0.03
Rnf38Q8BI21 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf38Q8BI21 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.21■□□□□ 0.03
Rnf38Q8BI21 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.21■□□□□ 0.03
Rnf38Q8BI21 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf38Q8BI21 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf38Q8BI21 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf38Q8BI21 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf38Q8BI21 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf38Q8BI21 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf38Q8BI21 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf38Q8BI21 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf38Q8BI21 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf38Q8BI21 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf38Q8BI21 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf38Q8BI21 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf38Q8BI21 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf38Q8BI21 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.2■□□□□ 0.02
Rnf38Q8BI21 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.2■□□□□ 0.02
Rnf38Q8BI21 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf38Q8BI21 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf38Q8BI21 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf38Q8BI21 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.2■□□□□ 0.02
Rnf38Q8BI21 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf38Q8BI21 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf38Q8BI21 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf38Q8BI21 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf38Q8BI21 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Rnf38Q8BI21 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf38Q8BI21 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf38Q8BI21 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Rnf38Q8BI21 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf38Q8BI21 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf38Q8BI21 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf38Q8BI21 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf38Q8BI21 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf38Q8BI21 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf38Q8BI21 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf38Q8BI21 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf38Q8BI21 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf38Q8BI21 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf38Q8BI21 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.19■□□□□ 0.02
Rnf38Q8BI21 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf38Q8BI21 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf38Q8BI21 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf38Q8BI21 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Rnf38Q8BI21 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf38Q8BI21 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf38Q8BI21 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf38Q8BI21 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms