Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Samm50Q8BGH2 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Samm50Q8BGH2 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.5■□□□□ 0.55
Samm50Q8BGH2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Samm50Q8BGH2 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Samm50Q8BGH2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Samm50Q8BGH2 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Samm50Q8BGH2 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Samm50Q8BGH2 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Samm50Q8BGH2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Samm50Q8BGH2 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
Samm50Q8BGH2 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Samm50Q8BGH2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.5■□□□□ 0.55
Samm50Q8BGH2 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Samm50Q8BGH2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Samm50Q8BGH2 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Samm50Q8BGH2 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Samm50Q8BGH2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.49■□□□□ 0.55
Samm50Q8BGH2 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Samm50Q8BGH2 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Samm50Q8BGH2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Samm50Q8BGH2 Gm15794-201ENSMUST00000120182 631 ntBASIC18.49■□□□□ 0.55
Samm50Q8BGH2 Olfr129-201ENSMUST00000122318 993 ntBASIC18.49■□□□□ 0.55
Samm50Q8BGH2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Samm50Q8BGH2 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Samm50Q8BGH2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.49■□□□□ 0.55
Samm50Q8BGH2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Samm50Q8BGH2 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Samm50Q8BGH2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Samm50Q8BGH2 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Samm50Q8BGH2 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Samm50Q8BGH2 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Samm50Q8BGH2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Samm50Q8BGH2 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Samm50Q8BGH2 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Samm50Q8BGH2 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Samm50Q8BGH2 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Samm50Q8BGH2 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Samm50Q8BGH2 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Samm50Q8BGH2 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Samm50Q8BGH2 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Samm50Q8BGH2 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Samm50Q8BGH2 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Samm50Q8BGH2 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Samm50Q8BGH2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Samm50Q8BGH2 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.48■□□□□ 0.55
Samm50Q8BGH2 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Samm50Q8BGH2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Samm50Q8BGH2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Samm50Q8BGH2 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Samm50Q8BGH2 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Samm50Q8BGH2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Samm50Q8BGH2 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Samm50Q8BGH2 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Samm50Q8BGH2 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Samm50Q8BGH2 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Samm50Q8BGH2 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Samm50Q8BGH2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Samm50Q8BGH2 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Samm50Q8BGH2 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Samm50Q8BGH2 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Samm50Q8BGH2 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Samm50Q8BGH2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Samm50Q8BGH2 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
Samm50Q8BGH2 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Samm50Q8BGH2 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.47■□□□□ 0.55
Samm50Q8BGH2 Gm18669-201ENSMUST00000216049 778 ntBASIC18.47■□□□□ 0.55
Samm50Q8BGH2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Samm50Q8BGH2 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.47■□□□□ 0.55
Samm50Q8BGH2 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Samm50Q8BGH2 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Samm50Q8BGH2 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Samm50Q8BGH2 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Samm50Q8BGH2 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Samm50Q8BGH2 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Samm50Q8BGH2 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Samm50Q8BGH2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Samm50Q8BGH2 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Samm50Q8BGH2 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Samm50Q8BGH2 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Samm50Q8BGH2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.46■□□□□ 0.55
Samm50Q8BGH2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Samm50Q8BGH2 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Samm50Q8BGH2 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Samm50Q8BGH2 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Samm50Q8BGH2 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.46■□□□□ 0.55
Samm50Q8BGH2 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Samm50Q8BGH2 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Samm50Q8BGH2 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Samm50Q8BGH2 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Samm50Q8BGH2 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Samm50Q8BGH2 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Samm50Q8BGH2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Samm50Q8BGH2 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Samm50Q8BGH2 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Samm50Q8BGH2 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Samm50Q8BGH2 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Samm50Q8BGH2 Gm29340-201ENSMUST00000188763 3854 ntBASIC18.46■□□□□ 0.54
Samm50Q8BGH2 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Samm50Q8BGH2 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms