Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.68■□□□□ 0.42
Trnp1Q80ZI1 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trnp1Q80ZI1 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trnp1Q80ZI1 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trnp1Q80ZI1 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.68■□□□□ 0.42
Trnp1Q80ZI1 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trnp1Q80ZI1 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.68■□□□□ 0.42
Trnp1Q80ZI1 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trnp1Q80ZI1 Gm27618-201ENSMUST00000183671 60 ntBASIC17.68■□□□□ 0.42
Trnp1Q80ZI1 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trnp1Q80ZI1 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trnp1Q80ZI1 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trnp1Q80ZI1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trnp1Q80ZI1 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trnp1Q80ZI1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trnp1Q80ZI1 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trnp1Q80ZI1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trnp1Q80ZI1 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trnp1Q80ZI1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trnp1Q80ZI1 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trnp1Q80ZI1 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.67■□□□□ 0.42
Trnp1Q80ZI1 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.67■□□□□ 0.42
Trnp1Q80ZI1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trnp1Q80ZI1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trnp1Q80ZI1 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trnp1Q80ZI1 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trnp1Q80ZI1 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.67■□□□□ 0.42
Trnp1Q80ZI1 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trnp1Q80ZI1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trnp1Q80ZI1 Haglr-201ENSMUST00000100000 2085 ntBASIC17.67■□□□□ 0.42
Trnp1Q80ZI1 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trnp1Q80ZI1 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trnp1Q80ZI1 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Trnp1Q80ZI1 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trnp1Q80ZI1 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trnp1Q80ZI1 Gm8318-201ENSMUST00000182954 872 ntBASIC17.67■□□□□ 0.42
Trnp1Q80ZI1 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.67■□□□□ 0.42
Trnp1Q80ZI1 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trnp1Q80ZI1 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trnp1Q80ZI1 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trnp1Q80ZI1 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trnp1Q80ZI1 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trnp1Q80ZI1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trnp1Q80ZI1 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.66■□□□□ 0.42
Trnp1Q80ZI1 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trnp1Q80ZI1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.66■□□□□ 0.42
Trnp1Q80ZI1 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.66■□□□□ 0.42
Trnp1Q80ZI1 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trnp1Q80ZI1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trnp1Q80ZI1 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
Trnp1Q80ZI1 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trnp1Q80ZI1 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trnp1Q80ZI1 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trnp1Q80ZI1 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trnp1Q80ZI1 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trnp1Q80ZI1 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trnp1Q80ZI1 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trnp1Q80ZI1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trnp1Q80ZI1 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trnp1Q80ZI1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Trnp1Q80ZI1 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.65■□□□□ 0.42
Trnp1Q80ZI1 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trnp1Q80ZI1 Gm6973-201ENSMUST00000117080 721 ntBASIC17.65■□□□□ 0.42
Trnp1Q80ZI1 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.65■□□□□ 0.42
Trnp1Q80ZI1 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC17.65■□□□□ 0.42
Trnp1Q80ZI1 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trnp1Q80ZI1 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.65■□□□□ 0.42
Trnp1Q80ZI1 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trnp1Q80ZI1 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trnp1Q80ZI1 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trnp1Q80ZI1 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trnp1Q80ZI1 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trnp1Q80ZI1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trnp1Q80ZI1 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trnp1Q80ZI1 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trnp1Q80ZI1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trnp1Q80ZI1 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trnp1Q80ZI1 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trnp1Q80ZI1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trnp1Q80ZI1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.65■□□□□ 0.42
Trnp1Q80ZI1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trnp1Q80ZI1 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trnp1Q80ZI1 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trnp1Q80ZI1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Trnp1Q80ZI1 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trnp1Q80ZI1 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trnp1Q80ZI1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trnp1Q80ZI1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trnp1Q80ZI1 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trnp1Q80ZI1 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.64■□□□□ 0.41
Trnp1Q80ZI1 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trnp1Q80ZI1 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trnp1Q80ZI1 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Trnp1Q80ZI1 Mir8102-201ENSMUST00000184148 139 ntBASIC17.64■□□□□ 0.41
Trnp1Q80ZI1 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trnp1Q80ZI1 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.64■□□□□ 0.41
Trnp1Q80ZI1 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trnp1Q80ZI1 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trnp1Q80ZI1 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trnp1Q80ZI1 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms