Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Gm11452-201ENSMUST00000122376 690 ntBASIC16.27■□□□□ 0.2
Trim62Q80V85 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.27■□□□□ 0.2
Trim62Q80V85 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim62Q80V85 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim62Q80V85 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trim62Q80V85 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim62Q80V85 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.27■□□□□ 0.2
Trim62Q80V85 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trim62Q80V85 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim62Q80V85 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim62Q80V85 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim62Q80V85 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim62Q80V85 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim62Q80V85 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim62Q80V85 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Trim62Q80V85 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim62Q80V85 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trim62Q80V85 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim62Q80V85 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim62Q80V85 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim62Q80V85 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim62Q80V85 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim62Q80V85 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim62Q80V85 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.26■□□□□ 0.19
Trim62Q80V85 Gm7222-201ENSMUST00000117512 906 ntBASIC16.26■□□□□ 0.19
Trim62Q80V85 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim62Q80V85 Gm7230-201ENSMUST00000173026 815 ntBASIC16.26■□□□□ 0.19
Trim62Q80V85 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Trim62Q80V85 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.26■□□□□ 0.19
Trim62Q80V85 Gm6089-201ENSMUST00000197666 938 ntBASIC16.26■□□□□ 0.19
Trim62Q80V85 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Trim62Q80V85 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim62Q80V85 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Trim62Q80V85 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim62Q80V85 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim62Q80V85 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim62Q80V85 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim62Q80V85 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim62Q80V85 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.26■□□□□ 0.19
Trim62Q80V85 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim62Q80V85 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim62Q80V85 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trim62Q80V85 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim62Q80V85 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
Trim62Q80V85 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim62Q80V85 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim62Q80V85 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim62Q80V85 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim62Q80V85 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim62Q80V85 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.25■□□□□ 0.19
Trim62Q80V85 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim62Q80V85 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trim62Q80V85 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim62Q80V85 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.25■□□□□ 0.19
Trim62Q80V85 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim62Q80V85 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim62Q80V85 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim62Q80V85 Gm15358-201ENSMUST00000119249 520 ntBASIC16.25■□□□□ 0.19
Trim62Q80V85 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim62Q80V85 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim62Q80V85 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim62Q80V85 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim62Q80V85 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim62Q80V85 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trim62Q80V85 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Trim62Q80V85 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Trim62Q80V85 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.25■□□□□ 0.19
Trim62Q80V85 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim62Q80V85 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim62Q80V85 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.25■□□□□ 0.19
Trim62Q80V85 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim62Q80V85 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trim62Q80V85 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim62Q80V85 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim62Q80V85 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim62Q80V85 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim62Q80V85 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim62Q80V85 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim62Q80V85 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim62Q80V85 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim62Q80V85 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim62Q80V85 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim62Q80V85 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim62Q80V85 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim62Q80V85 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim62Q80V85 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.24■□□□□ 0.19
Trim62Q80V85 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim62Q80V85 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim62Q80V85 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.24■□□□□ 0.19
Trim62Q80V85 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim62Q80V85 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim62Q80V85 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim62Q80V85 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.24■□□□□ 0.19
Trim62Q80V85 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim62Q80V85 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim62Q80V85 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.24■□□□□ 0.19
Trim62Q80V85 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim62Q80V85 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim62Q80V85 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim62Q80V85 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms