Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ush1gQ80T11 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ush1gQ80T11 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ush1gQ80T11 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ush1gQ80T11 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ush1gQ80T11 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ush1gQ80T11 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.19■□□□□ 0.34
Ush1gQ80T11 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Ush1gQ80T11 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ush1gQ80T11 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ush1gQ80T11 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Ush1gQ80T11 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ush1gQ80T11 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.18■□□□□ 0.34
Ush1gQ80T11 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ush1gQ80T11 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ush1gQ80T11 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ush1gQ80T11 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ush1gQ80T11 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ush1gQ80T11 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ush1gQ80T11 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Ush1gQ80T11 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Ush1gQ80T11 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.18■□□□□ 0.34
Ush1gQ80T11 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.18■□□□□ 0.34
Ush1gQ80T11 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ush1gQ80T11 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
Ush1gQ80T11 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ush1gQ80T11 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ush1gQ80T11 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ush1gQ80T11 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ush1gQ80T11 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Ush1gQ80T11 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ush1gQ80T11 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ush1gQ80T11 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ush1gQ80T11 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ush1gQ80T11 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.17■□□□□ 0.34
Ush1gQ80T11 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ush1gQ80T11 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ush1gQ80T11 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.17■□□□□ 0.34
Ush1gQ80T11 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ush1gQ80T11 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Ush1gQ80T11 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.17■□□□□ 0.34
Ush1gQ80T11 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.17■□□□□ 0.34
Ush1gQ80T11 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Ush1gQ80T11 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ush1gQ80T11 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.17■□□□□ 0.34
Ush1gQ80T11 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Ush1gQ80T11 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ush1gQ80T11 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ush1gQ80T11 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ush1gQ80T11 Gm10175-201ENSMUST00000086013 645 ntBASIC17.17■□□□□ 0.34
Ush1gQ80T11 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ush1gQ80T11 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ush1gQ80T11 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ush1gQ80T11 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ush1gQ80T11 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ush1gQ80T11 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ush1gQ80T11 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ush1gQ80T11 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ush1gQ80T11 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ush1gQ80T11 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ush1gQ80T11 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ush1gQ80T11 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ush1gQ80T11 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Ush1gQ80T11 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ush1gQ80T11 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.16■□□□□ 0.34
Ush1gQ80T11 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ush1gQ80T11 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ush1gQ80T11 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ush1gQ80T11 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ush1gQ80T11 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.16■□□□□ 0.34
Ush1gQ80T11 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.16■□□□□ 0.34
Ush1gQ80T11 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.16■□□□□ 0.34
Ush1gQ80T11 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.16■□□□□ 0.34
Ush1gQ80T11 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ush1gQ80T11 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ush1gQ80T11 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ush1gQ80T11 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ush1gQ80T11 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ush1gQ80T11 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ush1gQ80T11 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ush1gQ80T11 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ush1gQ80T11 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ush1gQ80T11 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ush1gQ80T11 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ush1gQ80T11 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ush1gQ80T11 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ush1gQ80T11 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Ush1gQ80T11 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ush1gQ80T11 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ush1gQ80T11 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.15■□□□□ 0.34
Ush1gQ80T11 Gm25911-201ENSMUST00000157621 56 ntBASIC17.15■□□□□ 0.34
Ush1gQ80T11 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.15■□□□□ 0.34
Ush1gQ80T11 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.15■□□□□ 0.34
Ush1gQ80T11 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.15■□□□□ 0.34
Ush1gQ80T11 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.15■□□□□ 0.34
Ush1gQ80T11 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ush1gQ80T11 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ush1gQ80T11 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ush1gQ80T11 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Ush1gQ80T11 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms