Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfx4Q7TNK1 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfx4Q7TNK1 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfx4Q7TNK1 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfx4Q7TNK1 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rfx4Q7TNK1 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfx4Q7TNK1 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Rfx4Q7TNK1 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.16■□□□□ 0.02
Rfx4Q7TNK1 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rfx4Q7TNK1 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfx4Q7TNK1 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.15■□□□□ 0.02
Rfx4Q7TNK1 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rfx4Q7TNK1 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfx4Q7TNK1 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfx4Q7TNK1 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfx4Q7TNK1 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfx4Q7TNK1 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.15■□□□□ 0.02
Rfx4Q7TNK1 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.15■□□□□ 0.02
Rfx4Q7TNK1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rfx4Q7TNK1 Odf3b-204ENSMUST00000227834 930 ntBASIC15.15■□□□□ 0.02
Rfx4Q7TNK1 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfx4Q7TNK1 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfx4Q7TNK1 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfx4Q7TNK1 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfx4Q7TNK1 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfx4Q7TNK1 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfx4Q7TNK1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.15■□□□□ 0.02
Rfx4Q7TNK1 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfx4Q7TNK1 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfx4Q7TNK1 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Rfx4Q7TNK1 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfx4Q7TNK1 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfx4Q7TNK1 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.14■□□□□ 0.01
Rfx4Q7TNK1 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Rfx4Q7TNK1 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Rfx4Q7TNK1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfx4Q7TNK1 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.14■□□□□ 0.01
Rfx4Q7TNK1 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfx4Q7TNK1 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.14■□□□□ 0.01
Rfx4Q7TNK1 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Rfx4Q7TNK1 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfx4Q7TNK1 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfx4Q7TNK1 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfx4Q7TNK1 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rfx4Q7TNK1 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Rfx4Q7TNK1 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfx4Q7TNK1 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rfx4Q7TNK1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfx4Q7TNK1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.14■□□□□ 0.01
Rfx4Q7TNK1 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rfx4Q7TNK1 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfx4Q7TNK1 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rfx4Q7TNK1 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.14■□□□□ 0.01
Rfx4Q7TNK1 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfx4Q7TNK1 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Rfx4Q7TNK1 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfx4Q7TNK1 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Rfx4Q7TNK1 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfx4Q7TNK1 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfx4Q7TNK1 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfx4Q7TNK1 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rfx4Q7TNK1 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfx4Q7TNK1 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rfx4Q7TNK1 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.13■□□□□ 0.01
Rfx4Q7TNK1 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rfx4Q7TNK1 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfx4Q7TNK1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rfx4Q7TNK1 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfx4Q7TNK1 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfx4Q7TNK1 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfx4Q7TNK1 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfx4Q7TNK1 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfx4Q7TNK1 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfx4Q7TNK1 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rfx4Q7TNK1 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
Rfx4Q7TNK1 Gm29257-201ENSMUST00000186115 639 ntBASIC15.13■□□□□ 0.01
Rfx4Q7TNK1 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfx4Q7TNK1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.13■□□□□ 0.01
Rfx4Q7TNK1 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.13■□□□□ 0.01
Rfx4Q7TNK1 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfx4Q7TNK1 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.13■□□□□ 0.01
Rfx4Q7TNK1 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfx4Q7TNK1 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfx4Q7TNK1 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rfx4Q7TNK1 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rfx4Q7TNK1 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rfx4Q7TNK1 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfx4Q7TNK1 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Rfx4Q7TNK1 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfx4Q7TNK1 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfx4Q7TNK1 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfx4Q7TNK1 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfx4Q7TNK1 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfx4Q7TNK1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rfx4Q7TNK1 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.12■□□□□ 0.01
Rfx4Q7TNK1 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfx4Q7TNK1 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfx4Q7TNK1 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfx4Q7TNK1 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfx4Q7TNK1 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms