Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sned1Q70E20 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sned1Q70E20 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sned1Q70E20 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sned1Q70E20 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sned1Q70E20 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sned1Q70E20 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Sned1Q70E20 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Sned1Q70E20 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sned1Q70E20 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sned1Q70E20 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sned1Q70E20 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sned1Q70E20 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Sned1Q70E20 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sned1Q70E20 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sned1Q70E20 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sned1Q70E20 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sned1Q70E20 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sned1Q70E20 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sned1Q70E20 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sned1Q70E20 Gm15163-201ENSMUST00000120749 1302 ntBASIC18.86■□□□□ 0.61
Sned1Q70E20 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Sned1Q70E20 Gm12859-201ENSMUST00000117834 427 ntBASIC18.85■□□□□ 0.61
Sned1Q70E20 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sned1Q70E20 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC18.85■□□□□ 0.61
Sned1Q70E20 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sned1Q70E20 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sned1Q70E20 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sned1Q70E20 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sned1Q70E20 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Sned1Q70E20 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Sned1Q70E20 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC18.85■□□□□ 0.61
Sned1Q70E20 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sned1Q70E20 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sned1Q70E20 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Sned1Q70E20 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sned1Q70E20 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sned1Q70E20 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Sned1Q70E20 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sned1Q70E20 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sned1Q70E20 Gm5357-201ENSMUST00000212720 1924 ntBASIC18.85■□□□□ 0.61
Sned1Q70E20 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sned1Q70E20 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sned1Q70E20 Gm14722-201ENSMUST00000118943 689 ntBASIC18.84■□□□□ 0.61
Sned1Q70E20 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sned1Q70E20 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC18.84■□□□□ 0.61
Sned1Q70E20 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC18.84■□□□□ 0.61
Sned1Q70E20 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC18.84■□□□□ 0.61
Sned1Q70E20 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sned1Q70E20 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sned1Q70E20 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sned1Q70E20 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Sned1Q70E20 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.84■□□□□ 0.61
Sned1Q70E20 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Sned1Q70E20 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sned1Q70E20 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sned1Q70E20 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sned1Q70E20 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.84■□□□□ 0.61
Sned1Q70E20 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Sned1Q70E20 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.84■□□□□ 0.61
Sned1Q70E20 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sned1Q70E20 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC18.83■□□□□ 0.61
Sned1Q70E20 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC18.83■□□□□ 0.61
Sned1Q70E20 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Sned1Q70E20 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC18.83■□□□□ 0.61
Sned1Q70E20 AC125350.2-201ENSMUST00000224737 727 ntBASIC18.83■□□□□ 0.61
Sned1Q70E20 AC154239.3-201ENSMUST00000226933 674 ntBASIC18.83■□□□□ 0.61
Sned1Q70E20 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sned1Q70E20 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.83■□□□□ 0.61
Sned1Q70E20 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Sned1Q70E20 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sned1Q70E20 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Sned1Q70E20 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Sned1Q70E20 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sned1Q70E20 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Sned1Q70E20 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sned1Q70E20 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sned1Q70E20 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sned1Q70E20 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sned1Q70E20 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC18.83■□□□□ 0.6
Sned1Q70E20 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.83■□□□□ 0.6
Sned1Q70E20 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sned1Q70E20 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sned1Q70E20 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sned1Q70E20 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sned1Q70E20 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sned1Q70E20 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sned1Q70E20 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.82■□□□□ 0.6
Sned1Q70E20 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sned1Q70E20 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sned1Q70E20 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sned1Q70E20 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sned1Q70E20 Gm8096-201ENSMUST00000209921 1591 ntBASIC18.82■□□□□ 0.6
Sned1Q70E20 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sned1Q70E20 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sned1Q70E20 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC18.82■□□□□ 0.6
Sned1Q70E20 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Sned1Q70E20 Gm27920-201ENSMUST00000183953 96 ntBASIC18.82■□□□□ 0.6
Sned1Q70E20 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sned1Q70E20 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms