Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm8Q6ZWM4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm8Q6ZWM4 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Lsm8Q6ZWM4 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm8Q6ZWM4 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.5■□□□□ 0.23
Lsm8Q6ZWM4 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm8Q6ZWM4 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm8Q6ZWM4 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm8Q6ZWM4 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm8Q6ZWM4 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm8Q6ZWM4 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Lsm8Q6ZWM4 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Lsm8Q6ZWM4 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm8Q6ZWM4 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.5■□□□□ 0.23
Lsm8Q6ZWM4 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm8Q6ZWM4 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm8Q6ZWM4 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm8Q6ZWM4 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm8Q6ZWM4 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm8Q6ZWM4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Lsm8Q6ZWM4 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm8Q6ZWM4 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm8Q6ZWM4 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm8Q6ZWM4 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm8Q6ZWM4 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm8Q6ZWM4 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm8Q6ZWM4 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm8Q6ZWM4 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm8Q6ZWM4 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 Gm28033-201ENSMUST00000184224 96 ntBASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 Gm19164-201ENSMUST00000210667 640 ntBASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 Gm8655-201ENSMUST00000221159 852 ntBASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm8Q6ZWM4 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm8Q6ZWM4 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm8Q6ZWM4 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm8Q6ZWM4 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm8Q6ZWM4 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
Lsm8Q6ZWM4 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm8Q6ZWM4 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Lsm8Q6ZWM4 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Lsm8Q6ZWM4 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm8Q6ZWM4 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm8Q6ZWM4 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm8Q6ZWM4 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.48■□□□□ 0.23
Lsm8Q6ZWM4 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Lsm8Q6ZWM4 Gm8344-201ENSMUST00000119813 856 ntBASIC16.48■□□□□ 0.23
Lsm8Q6ZWM4 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm8Q6ZWM4 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.48■□□□□ 0.23
Lsm8Q6ZWM4 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm8Q6ZWM4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm8Q6ZWM4 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.48■□□□□ 0.23
Lsm8Q6ZWM4 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm8Q6ZWM4 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm8Q6ZWM4 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm8Q6ZWM4 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm8Q6ZWM4 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm8Q6ZWM4 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Lsm8Q6ZWM4 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Lsm8Q6ZWM4 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm8Q6ZWM4 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm8Q6ZWM4 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm8Q6ZWM4 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Lsm8Q6ZWM4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm8Q6ZWM4 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm8Q6ZWM4 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm8Q6ZWM4 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm8Q6ZWM4 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm8Q6ZWM4 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm8Q6ZWM4 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms