Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf220Q6PDX6 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Rnf220Q6PDX6 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.99□□□□□ -0.01
Rnf220Q6PDX6 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf220Q6PDX6 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf220Q6PDX6 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf220Q6PDX6 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf220Q6PDX6 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf220Q6PDX6 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.98□□□□□ -0.01
Rnf220Q6PDX6 Gm5643-201ENSMUST00000117081 966 ntBASIC14.98□□□□□ -0.01
Rnf220Q6PDX6 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf220Q6PDX6 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC14.98□□□□□ -0.01
Rnf220Q6PDX6 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf220Q6PDX6 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf220Q6PDX6 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.98□□□□□ -0.01
Rnf220Q6PDX6 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf220Q6PDX6 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Rnf220Q6PDX6 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf220Q6PDX6 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Rnf220Q6PDX6 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf220Q6PDX6 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf220Q6PDX6 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf220Q6PDX6 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf220Q6PDX6 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Rnf220Q6PDX6 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.98□□□□□ -0.01
Rnf220Q6PDX6 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf220Q6PDX6 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf220Q6PDX6 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Rnf220Q6PDX6 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf220Q6PDX6 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf220Q6PDX6 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf220Q6PDX6 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf220Q6PDX6 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf220Q6PDX6 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf220Q6PDX6 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf220Q6PDX6 Gm15378-201ENSMUST00000121894 207 ntBASIC14.97□□□□□ -0.01
Rnf220Q6PDX6 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.97□□□□□ -0.01
Rnf220Q6PDX6 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.97□□□□□ -0.01
Rnf220Q6PDX6 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf220Q6PDX6 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf220Q6PDX6 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf220Q6PDX6 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf220Q6PDX6 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf220Q6PDX6 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf220Q6PDX6 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf220Q6PDX6 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf220Q6PDX6 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.97□□□□□ -0.01
Rnf220Q6PDX6 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf220Q6PDX6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf220Q6PDX6 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf220Q6PDX6 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Rnf220Q6PDX6 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf220Q6PDX6 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf220Q6PDX6 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf220Q6PDX6 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf220Q6PDX6 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf220Q6PDX6 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Rnf220Q6PDX6 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Rnf220Q6PDX6 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.96□□□□□ -0.01
Rnf220Q6PDX6 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf220Q6PDX6 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf220Q6PDX6 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.96□□□□□ -0.01
Rnf220Q6PDX6 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.96□□□□□ -0.01
Rnf220Q6PDX6 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf220Q6PDX6 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf220Q6PDX6 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf220Q6PDX6 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Rnf220Q6PDX6 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.96□□□□□ -0.01
Rnf220Q6PDX6 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Rnf220Q6PDX6 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.96□□□□□ -0.01
Rnf220Q6PDX6 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.96□□□□□ -0.01
Rnf220Q6PDX6 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.96□□□□□ -0.01
Rnf220Q6PDX6 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf220Q6PDX6 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf220Q6PDX6 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rnf220Q6PDX6 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Rnf220Q6PDX6 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rnf220Q6PDX6 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Rnf220Q6PDX6 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.02
Rnf220Q6PDX6 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rnf220Q6PDX6 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rnf220Q6PDX6 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rnf220Q6PDX6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf220Q6PDX6 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf220Q6PDX6 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf220Q6PDX6 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf220Q6PDX6 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
Rnf220Q6PDX6 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Rnf220Q6PDX6 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf220Q6PDX6 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf220Q6PDX6 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf220Q6PDX6 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf220Q6PDX6 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf220Q6PDX6 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf220Q6PDX6 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Rnf220Q6PDX6 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Rnf220Q6PDX6 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf220Q6PDX6 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf220Q6PDX6 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf220Q6PDX6 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms