Protein–RNA interactions for Protein: Q6NZK8

Ptpdc1, Protein tyrosine phosphatase domain-containing protein 1, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpdc1Q6NZK8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ptpdc1Q6NZK8 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ptpdc1Q6NZK8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ptpdc1Q6NZK8 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ptpdc1Q6NZK8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.12■□□□□ 0.65
Ptpdc1Q6NZK8 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ptpdc1Q6NZK8 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.12■□□□□ 0.65
Ptpdc1Q6NZK8 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19.12■□□□□ 0.65
Ptpdc1Q6NZK8 Gm9103-201ENSMUST00000119371 405 ntBASIC19.12■□□□□ 0.65
Ptpdc1Q6NZK8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC19.12■□□□□ 0.65
Ptpdc1Q6NZK8 AC127302.2-201ENSMUST00000215212 268 ntBASIC19.12■□□□□ 0.65
Ptpdc1Q6NZK8 AC117588.1-201ENSMUST00000228510 999 ntBASIC19.12■□□□□ 0.65
Ptpdc1Q6NZK8 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ptpdc1Q6NZK8 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ptpdc1Q6NZK8 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ptpdc1Q6NZK8 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC19.12■□□□□ 0.65
Ptpdc1Q6NZK8 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ptpdc1Q6NZK8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ptpdc1Q6NZK8 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ptpdc1Q6NZK8 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ptpdc1Q6NZK8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ptpdc1Q6NZK8 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ptpdc1Q6NZK8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ptpdc1Q6NZK8 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC19.11■□□□□ 0.65
Ptpdc1Q6NZK8 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ptpdc1Q6NZK8 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ptpdc1Q6NZK8 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ptpdc1Q6NZK8 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC19.11■□□□□ 0.65
Ptpdc1Q6NZK8 Gm12497-201ENSMUST00000138778 237 ntBASIC19.11■□□□□ 0.65
Ptpdc1Q6NZK8 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC19.11■□□□□ 0.65
Ptpdc1Q6NZK8 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.11■□□□□ 0.65
Ptpdc1Q6NZK8 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ptpdc1Q6NZK8 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ptpdc1Q6NZK8 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ptpdc1Q6NZK8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ptpdc1Q6NZK8 Gm10819-201ENSMUST00000099988 561 ntBASIC19.11■□□□□ 0.65
Ptpdc1Q6NZK8 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ptpdc1Q6NZK8 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ptpdc1Q6NZK8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Ptpdc1Q6NZK8 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ptpdc1Q6NZK8 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ptpdc1Q6NZK8 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ptpdc1Q6NZK8 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ptpdc1Q6NZK8 Gm7669-201ENSMUST00000210184 1603 ntBASIC19.11■□□□□ 0.65
Ptpdc1Q6NZK8 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ptpdc1Q6NZK8 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ptpdc1Q6NZK8 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ptpdc1Q6NZK8 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ptpdc1Q6NZK8 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Ptpdc1Q6NZK8 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ptpdc1Q6NZK8 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ptpdc1Q6NZK8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ptpdc1Q6NZK8 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ptpdc1Q6NZK8 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Ptpdc1Q6NZK8 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ptpdc1Q6NZK8 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ptpdc1Q6NZK8 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Ptpdc1Q6NZK8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.1■□□□□ 0.65
Ptpdc1Q6NZK8 Gm18622-201ENSMUST00000219361 595 ntBASIC19.1■□□□□ 0.65
Ptpdc1Q6NZK8 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19.1■□□□□ 0.65
Ptpdc1Q6NZK8 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Ptpdc1Q6NZK8 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Ptpdc1Q6NZK8 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Ptpdc1Q6NZK8 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ptpdc1Q6NZK8 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ptpdc1Q6NZK8 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ptpdc1Q6NZK8 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ptpdc1Q6NZK8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ptpdc1Q6NZK8 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ptpdc1Q6NZK8 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ptpdc1Q6NZK8 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ptpdc1Q6NZK8 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ptpdc1Q6NZK8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ptpdc1Q6NZK8 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Ptpdc1Q6NZK8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
Ptpdc1Q6NZK8 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Ptpdc1Q6NZK8 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Ptpdc1Q6NZK8 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ptpdc1Q6NZK8 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ptpdc1Q6NZK8 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Ptpdc1Q6NZK8 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ptpdc1Q6NZK8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ptpdc1Q6NZK8 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ptpdc1Q6NZK8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC19.09■□□□□ 0.65
Ptpdc1Q6NZK8 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ptpdc1Q6NZK8 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ptpdc1Q6NZK8 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ptpdc1Q6NZK8 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ptpdc1Q6NZK8 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.09■□□□□ 0.65
Ptpdc1Q6NZK8 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
Ptpdc1Q6NZK8 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Ptpdc1Q6NZK8 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ptpdc1Q6NZK8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ptpdc1Q6NZK8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ptpdc1Q6NZK8 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Ptpdc1Q6NZK8 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ptpdc1Q6NZK8 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ptpdc1Q6NZK8 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ptpdc1Q6NZK8 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Ptpdc1Q6NZK8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms