Protein–RNA interactions for Protein: Q6DFV6

Fndc3c1, Fibronectin type III domain containing protein 3C1, mousemouse

Predictions only

Length 1,356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc3c1Q6DFV6 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Fndc3c1Q6DFV6 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Fndc3c1Q6DFV6 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Fndc3c1Q6DFV6 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Fndc3c1Q6DFV6 Gm15693-201ENSMUST00000120470 637 ntBASIC17.59■□□□□ 0.41
Fndc3c1Q6DFV6 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.59■□□□□ 0.41
Fndc3c1Q6DFV6 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.59■□□□□ 0.41
Fndc3c1Q6DFV6 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.59■□□□□ 0.41
Fndc3c1Q6DFV6 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.59■□□□□ 0.41
Fndc3c1Q6DFV6 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Fndc3c1Q6DFV6 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Fndc3c1Q6DFV6 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Fndc3c1Q6DFV6 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Fndc3c1Q6DFV6 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Fndc3c1Q6DFV6 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Fndc3c1Q6DFV6 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Fndc3c1Q6DFV6 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Fndc3c1Q6DFV6 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Fndc3c1Q6DFV6 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Fndc3c1Q6DFV6 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Fndc3c1Q6DFV6 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Fndc3c1Q6DFV6 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Fndc3c1Q6DFV6 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Fndc3c1Q6DFV6 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Fndc3c1Q6DFV6 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.58■□□□□ 0.4
Fndc3c1Q6DFV6 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Fndc3c1Q6DFV6 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.58■□□□□ 0.4
Fndc3c1Q6DFV6 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Fndc3c1Q6DFV6 Gm27306-201ENSMUST00000183970 107 ntBASIC17.58■□□□□ 0.4
Fndc3c1Q6DFV6 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.58■□□□□ 0.4
Fndc3c1Q6DFV6 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.58■□□□□ 0.4
Fndc3c1Q6DFV6 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Fndc3c1Q6DFV6 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Fndc3c1Q6DFV6 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Fndc3c1Q6DFV6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Fndc3c1Q6DFV6 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Fndc3c1Q6DFV6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Fndc3c1Q6DFV6 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Fndc3c1Q6DFV6 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Fndc3c1Q6DFV6 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Fndc3c1Q6DFV6 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Fndc3c1Q6DFV6 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Fndc3c1Q6DFV6 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Fndc3c1Q6DFV6 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Fndc3c1Q6DFV6 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Fndc3c1Q6DFV6 Gm5779-201ENSMUST00000218467 910 ntBASIC17.57■□□□□ 0.4
Fndc3c1Q6DFV6 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Fndc3c1Q6DFV6 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Fndc3c1Q6DFV6 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Fndc3c1Q6DFV6 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Fndc3c1Q6DFV6 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Fndc3c1Q6DFV6 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Fndc3c1Q6DFV6 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Fndc3c1Q6DFV6 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Fndc3c1Q6DFV6 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fndc3c1Q6DFV6 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fndc3c1Q6DFV6 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.56■□□□□ 0.4
Fndc3c1Q6DFV6 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Fndc3c1Q6DFV6 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Fndc3c1Q6DFV6 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Fndc3c1Q6DFV6 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.56■□□□□ 0.4
Fndc3c1Q6DFV6 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Fndc3c1Q6DFV6 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fndc3c1Q6DFV6 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Fndc3c1Q6DFV6 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fndc3c1Q6DFV6 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fndc3c1Q6DFV6 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fndc3c1Q6DFV6 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fndc3c1Q6DFV6 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fndc3c1Q6DFV6 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fndc3c1Q6DFV6 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fndc3c1Q6DFV6 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.56■□□□□ 0.4
Fndc3c1Q6DFV6 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fndc3c1Q6DFV6 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fndc3c1Q6DFV6 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fndc3c1Q6DFV6 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fndc3c1Q6DFV6 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.55■□□□□ 0.4
Fndc3c1Q6DFV6 Gm13823-201ENSMUST00000119930 345 ntBASIC17.55■□□□□ 0.4
Fndc3c1Q6DFV6 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fndc3c1Q6DFV6 Gm2272-201ENSMUST00000194903 582 ntBASIC17.55■□□□□ 0.4
Fndc3c1Q6DFV6 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fndc3c1Q6DFV6 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fndc3c1Q6DFV6 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Fndc3c1Q6DFV6 Gm2423-201ENSMUST00000074863 733 ntBASIC17.55■□□□□ 0.4
Fndc3c1Q6DFV6 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Fndc3c1Q6DFV6 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fndc3c1Q6DFV6 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Fndc3c1Q6DFV6 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.55■□□□□ 0.4
Fndc3c1Q6DFV6 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fndc3c1Q6DFV6 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fndc3c1Q6DFV6 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17.54■□□□□ 0.4
Fndc3c1Q6DFV6 Gm8318-201ENSMUST00000182954 872 ntBASIC17.54■□□□□ 0.4
Fndc3c1Q6DFV6 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.54■□□□□ 0.4
Fndc3c1Q6DFV6 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Fndc3c1Q6DFV6 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Fndc3c1Q6DFV6 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fndc3c1Q6DFV6 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fndc3c1Q6DFV6 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fndc3c1Q6DFV6 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fndc3c1Q6DFV6 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms