Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scube3Q66PY1 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scube3Q66PY1 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scube3Q66PY1 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scube3Q66PY1 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.51■□□□□ 0.23
Scube3Q66PY1 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.51■□□□□ 0.23
Scube3Q66PY1 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scube3Q66PY1 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scube3Q66PY1 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.51■□□□□ 0.23
Scube3Q66PY1 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Scube3Q66PY1 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scube3Q66PY1 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.51■□□□□ 0.23
Scube3Q66PY1 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC16.51■□□□□ 0.23
Scube3Q66PY1 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Scube3Q66PY1 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scube3Q66PY1 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.51■□□□□ 0.23
Scube3Q66PY1 Mzt1-203ENSMUST00000227948 952 ntBASIC16.51■□□□□ 0.23
Scube3Q66PY1 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scube3Q66PY1 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.51■□□□□ 0.23
Scube3Q66PY1 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Scube3Q66PY1 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scube3Q66PY1 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scube3Q66PY1 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Scube3Q66PY1 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scube3Q66PY1 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scube3Q66PY1 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Scube3Q66PY1 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
Scube3Q66PY1 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Scube3Q66PY1 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scube3Q66PY1 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Scube3Q66PY1 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scube3Q66PY1 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scube3Q66PY1 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scube3Q66PY1 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scube3Q66PY1 Grk6-207ENSMUST00000225925 2769 ntBASIC16.5■□□□□ 0.23
Scube3Q66PY1 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Scube3Q66PY1 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Scube3Q66PY1 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scube3Q66PY1 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scube3Q66PY1 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scube3Q66PY1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scube3Q66PY1 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scube3Q66PY1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.5■□□□□ 0.23
Scube3Q66PY1 Gm25990-201ENSMUST00000102440 86 ntBASIC16.5■□□□□ 0.23
Scube3Q66PY1 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.5■□□□□ 0.23
Scube3Q66PY1 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.5■□□□□ 0.23
Scube3Q66PY1 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scube3Q66PY1 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Scube3Q66PY1 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scube3Q66PY1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Scube3Q66PY1 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scube3Q66PY1 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scube3Q66PY1 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Scube3Q66PY1 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Scube3Q66PY1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Scube3Q66PY1 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Scube3Q66PY1 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Scube3Q66PY1 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scube3Q66PY1 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.49■□□□□ 0.23
Scube3Q66PY1 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scube3Q66PY1 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scube3Q66PY1 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.49■□□□□ 0.23
Scube3Q66PY1 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Scube3Q66PY1 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Scube3Q66PY1 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
Scube3Q66PY1 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
Scube3Q66PY1 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
Scube3Q66PY1 Gm6089-201ENSMUST00000197666 938 ntBASIC16.49■□□□□ 0.23
Scube3Q66PY1 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scube3Q66PY1 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scube3Q66PY1 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Scube3Q66PY1 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scube3Q66PY1 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Scube3Q66PY1 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scube3Q66PY1 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scube3Q66PY1 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scube3Q66PY1 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Scube3Q66PY1 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Scube3Q66PY1 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scube3Q66PY1 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scube3Q66PY1 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scube3Q66PY1 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scube3Q66PY1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Scube3Q66PY1 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.48■□□□□ 0.23
Scube3Q66PY1 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scube3Q66PY1 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scube3Q66PY1 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.48■□□□□ 0.23
Scube3Q66PY1 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scube3Q66PY1 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scube3Q66PY1 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Scube3Q66PY1 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Scube3Q66PY1 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.48■□□□□ 0.23
Scube3Q66PY1 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC16.48■□□□□ 0.23
Scube3Q66PY1 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.48■□□□□ 0.23
Scube3Q66PY1 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Scube3Q66PY1 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.48■□□□□ 0.23
Scube3Q66PY1 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scube3Q66PY1 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.48■□□□□ 0.23
Scube3Q66PY1 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.48■□□□□ 0.23
Scube3Q66PY1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms