Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.12■□□□□ 0.49
Foxd1Q61345 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Foxd1Q61345 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Foxd1Q61345 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Foxd1Q61345 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Foxd1Q61345 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Foxd1Q61345 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Foxd1Q61345 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Foxd1Q61345 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Foxd1Q61345 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Foxd1Q61345 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Foxd1Q61345 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Foxd1Q61345 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Foxd1Q61345 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Foxd1Q61345 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Foxd1Q61345 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.11■□□□□ 0.49
Foxd1Q61345 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Foxd1Q61345 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Foxd1Q61345 Gm43474-201ENSMUST00000196415 774 ntBASIC18.11■□□□□ 0.49
Foxd1Q61345 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Foxd1Q61345 Wdyhv1-203ENSMUST00000226889 394 ntBASIC18.11■□□□□ 0.49
Foxd1Q61345 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Foxd1Q61345 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Foxd1Q61345 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Foxd1Q61345 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Foxd1Q61345 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Foxd1Q61345 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Foxd1Q61345 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Foxd1Q61345 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Foxd1Q61345 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.11■□□□□ 0.49
Foxd1Q61345 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Foxd1Q61345 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Foxd1Q61345 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Foxd1Q61345 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Foxd1Q61345 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Foxd1Q61345 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Foxd1Q61345 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Foxd1Q61345 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Foxd1Q61345 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Foxd1Q61345 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Foxd1Q61345 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Foxd1Q61345 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Foxd1Q61345 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Foxd1Q61345 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Foxd1Q61345 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Foxd1Q61345 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Foxd1Q61345 Mir8102-201ENSMUST00000184148 139 ntBASIC18.1■□□□□ 0.49
Foxd1Q61345 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Foxd1Q61345 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Foxd1Q61345 AC130829.1-201ENSMUST00000221548 494 ntBASIC18.1■□□□□ 0.49
Foxd1Q61345 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Foxd1Q61345 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Foxd1Q61345 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Foxd1Q61345 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Foxd1Q61345 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Foxd1Q61345 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Foxd1Q61345 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Foxd1Q61345 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Foxd1Q61345 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Foxd1Q61345 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Foxd1Q61345 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Foxd1Q61345 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Foxd1Q61345 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Foxd1Q61345 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Foxd1Q61345 Mir449b-201ENSMUST00000104833 80 ntBASIC18.09■□□□□ 0.49
Foxd1Q61345 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Foxd1Q61345 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Foxd1Q61345 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Foxd1Q61345 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Foxd1Q61345 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Foxd1Q61345 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Foxd1Q61345 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Foxd1Q61345 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.09■□□□□ 0.49
Foxd1Q61345 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Foxd1Q61345 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.09■□□□□ 0.49
Foxd1Q61345 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Foxd1Q61345 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Foxd1Q61345 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Foxd1Q61345 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.49
Foxd1Q61345 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Foxd1Q61345 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Foxd1Q61345 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Foxd1Q61345 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Foxd1Q61345 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
Foxd1Q61345 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Foxd1Q61345 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Foxd1Q61345 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.08■□□□□ 0.49
Foxd1Q61345 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Foxd1Q61345 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Foxd1Q61345 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Foxd1Q61345 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Foxd1Q61345 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.08■□□□□ 0.48
Foxd1Q61345 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Foxd1Q61345 Gm12490-201ENSMUST00000120255 560 ntBASIC18.08■□□□□ 0.48
Foxd1Q61345 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC18.08■□□□□ 0.48
Foxd1Q61345 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC18.08■□□□□ 0.48
Foxd1Q61345 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC18.08■□□□□ 0.48
Foxd1Q61345 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC18.08■□□□□ 0.48
Foxd1Q61345 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Foxd1Q61345 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms