Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.51□□□□□ -0.25
Clns1aQ61189 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clns1aQ61189 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Clns1aQ61189 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clns1aQ61189 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clns1aQ61189 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clns1aQ61189 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clns1aQ61189 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.51□□□□□ -0.25
Clns1aQ61189 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clns1aQ61189 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clns1aQ61189 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clns1aQ61189 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clns1aQ61189 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clns1aQ61189 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Clns1aQ61189 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clns1aQ61189 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clns1aQ61189 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clns1aQ61189 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clns1aQ61189 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clns1aQ61189 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clns1aQ61189 Phf7-203ENSMUST00000226565 1971 ntBASIC13.51□□□□□ -0.25
Clns1aQ61189 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.51□□□□□ -0.25
Clns1aQ61189 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clns1aQ61189 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clns1aQ61189 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clns1aQ61189 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clns1aQ61189 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clns1aQ61189 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clns1aQ61189 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.5□□□□□ -0.25
Clns1aQ61189 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.5□□□□□ -0.25
Clns1aQ61189 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clns1aQ61189 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Clns1aQ61189 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.5□□□□□ -0.25
Clns1aQ61189 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clns1aQ61189 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.5□□□□□ -0.25
Clns1aQ61189 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clns1aQ61189 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.5□□□□□ -0.25
Clns1aQ61189 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clns1aQ61189 Gm36967-201ENSMUST00000193814 266 ntBASIC13.5□□□□□ -0.25
Clns1aQ61189 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.5□□□□□ -0.25
Clns1aQ61189 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clns1aQ61189 Gm7791-201ENSMUST00000219066 539 ntBASIC13.5□□□□□ -0.25
Clns1aQ61189 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clns1aQ61189 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Clns1aQ61189 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clns1aQ61189 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clns1aQ61189 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clns1aQ61189 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clns1aQ61189 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clns1aQ61189 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clns1aQ61189 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clns1aQ61189 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.5□□□□□ -0.25
Clns1aQ61189 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clns1aQ61189 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clns1aQ61189 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clns1aQ61189 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clns1aQ61189 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.49□□□□□ -0.25
Clns1aQ61189 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clns1aQ61189 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clns1aQ61189 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clns1aQ61189 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clns1aQ61189 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clns1aQ61189 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clns1aQ61189 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clns1aQ61189 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clns1aQ61189 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clns1aQ61189 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.49□□□□□ -0.25
Clns1aQ61189 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.49□□□□□ -0.25
Clns1aQ61189 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clns1aQ61189 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clns1aQ61189 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Clns1aQ61189 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clns1aQ61189 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Clns1aQ61189 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clns1aQ61189 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.49□□□□□ -0.25
Clns1aQ61189 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clns1aQ61189 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clns1aQ61189 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clns1aQ61189 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clns1aQ61189 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clns1aQ61189 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.49□□□□□ -0.25
Clns1aQ61189 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clns1aQ61189 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clns1aQ61189 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Clns1aQ61189 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clns1aQ61189 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clns1aQ61189 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Clns1aQ61189 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Clns1aQ61189 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clns1aQ61189 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clns1aQ61189 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clns1aQ61189 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clns1aQ61189 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clns1aQ61189 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
Clns1aQ61189 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clns1aQ61189 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clns1aQ61189 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clns1aQ61189 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clns1aQ61189 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Clns1aQ61189 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms