Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxd3Q61060 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxd3Q61060 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxd3Q61060 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.48□□□□□ -0.09
Foxd3Q61060 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Foxd3Q61060 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.48□□□□□ -0.09
Foxd3Q61060 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Foxd3Q61060 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxd3Q61060 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.48□□□□□ -0.09
Foxd3Q61060 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxd3Q61060 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxd3Q61060 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Foxd3Q61060 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxd3Q61060 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Foxd3Q61060 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxd3Q61060 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxd3Q61060 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Foxd3Q61060 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxd3Q61060 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxd3Q61060 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxd3Q61060 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.48□□□□□ -0.09
Foxd3Q61060 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Foxd3Q61060 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxd3Q61060 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxd3Q61060 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxd3Q61060 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxd3Q61060 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Foxd3Q61060 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxd3Q61060 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxd3Q61060 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxd3Q61060 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Foxd3Q61060 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxd3Q61060 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxd3Q61060 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.47□□□□□ -0.09
Foxd3Q61060 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxd3Q61060 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxd3Q61060 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.47□□□□□ -0.09
Foxd3Q61060 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxd3Q61060 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Foxd3Q61060 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxd3Q61060 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxd3Q61060 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxd3Q61060 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxd3Q61060 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxd3Q61060 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Foxd3Q61060 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxd3Q61060 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxd3Q61060 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxd3Q61060 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxd3Q61060 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Foxd3Q61060 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Foxd3Q61060 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Foxd3Q61060 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.46□□□□□ -0.09
Foxd3Q61060 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.46□□□□□ -0.09
Foxd3Q61060 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Foxd3Q61060 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Foxd3Q61060 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Foxd3Q61060 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.46□□□□□ -0.09
Foxd3Q61060 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Foxd3Q61060 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Foxd3Q61060 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Foxd3Q61060 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.46□□□□□ -0.09
Foxd3Q61060 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Foxd3Q61060 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Foxd3Q61060 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.46□□□□□ -0.09
Foxd3Q61060 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.46□□□□□ -0.09
Foxd3Q61060 Gm37722-201ENSMUST00000193757 208 ntBASIC14.46□□□□□ -0.09
Foxd3Q61060 Gm18669-201ENSMUST00000216049 778 ntBASIC14.46□□□□□ -0.09
Foxd3Q61060 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Foxd3Q61060 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Foxd3Q61060 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Foxd3Q61060 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Foxd3Q61060 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Foxd3Q61060 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Foxd3Q61060 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Foxd3Q61060 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Foxd3Q61060 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Foxd3Q61060 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Foxd3Q61060 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Foxd3Q61060 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Foxd3Q61060 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.45□□□□□ -0.1
Foxd3Q61060 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Foxd3Q61060 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Foxd3Q61060 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Foxd3Q61060 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Foxd3Q61060 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Foxd3Q61060 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Foxd3Q61060 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Foxd3Q61060 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Foxd3Q61060 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Foxd3Q61060 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Foxd3Q61060 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.45□□□□□ -0.1
Foxd3Q61060 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Foxd3Q61060 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Foxd3Q61060 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Foxd3Q61060 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.45□□□□□ -0.1
Foxd3Q61060 Mzt1-203ENSMUST00000227948 952 ntBASIC14.45□□□□□ -0.1
Foxd3Q61060 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Foxd3Q61060 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Foxd3Q61060 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms