Protein–RNA interactions for Protein: Q60765

Atf3, Cyclic AMP-dependent transcription factor ATF-3, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf3Q60765 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Atf3Q60765 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Atf3Q60765 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Atf3Q60765 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Atf3Q60765 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Atf3Q60765 Gm8410-201ENSMUST00000117225 605 ntBASIC21.03■□□□□ 0.96
Atf3Q60765 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC21.03■□□□□ 0.96
Atf3Q60765 Rbfox2-208ENSMUST00000227930 1218 ntBASIC21.03■□□□□ 0.96
Atf3Q60765 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Atf3Q60765 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Atf3Q60765 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Atf3Q60765 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC21.03■□□□□ 0.96
Atf3Q60765 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Atf3Q60765 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC21.03■□□□□ 0.96
Atf3Q60765 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC21.03■□□□□ 0.96
Atf3Q60765 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC21.03■□□□□ 0.96
Atf3Q60765 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Atf3Q60765 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Atf3Q60765 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Atf3Q60765 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Atf3Q60765 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC21.02■□□□□ 0.96
Atf3Q60765 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC21.02■□□□□ 0.96
Atf3Q60765 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC21.02■□□□□ 0.96
Atf3Q60765 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Atf3Q60765 Gm9824-201ENSMUST00000178707 561 ntBASIC21.02■□□□□ 0.96
Atf3Q60765 Gm7286-201ENSMUST00000182691 1007 ntBASIC21.02■□□□□ 0.96
Atf3Q60765 Gm18187-201ENSMUST00000196476 984 ntBASIC21.02■□□□□ 0.96
Atf3Q60765 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Atf3Q60765 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC21.02■□□□□ 0.96
Atf3Q60765 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC21.02■□□□□ 0.96
Atf3Q60765 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Atf3Q60765 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Atf3Q60765 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Atf3Q60765 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC21.02■□□□□ 0.96
Atf3Q60765 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC21.02■□□□□ 0.96
Atf3Q60765 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Atf3Q60765 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Atf3Q60765 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Atf3Q60765 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Atf3Q60765 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Atf3Q60765 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Atf3Q60765 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Atf3Q60765 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC21.01■□□□□ 0.95
Atf3Q60765 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Atf3Q60765 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC21.01■□□□□ 0.95
Atf3Q60765 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC21.01■□□□□ 0.95
Atf3Q60765 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Atf3Q60765 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Atf3Q60765 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.01■□□□□ 0.95
Atf3Q60765 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Atf3Q60765 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC21.01■□□□□ 0.95
Atf3Q60765 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Atf3Q60765 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Atf3Q60765 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Atf3Q60765 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC21■□□□□ 0.95
Atf3Q60765 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC21■□□□□ 0.95
Atf3Q60765 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Atf3Q60765 Gm18737-201ENSMUST00000173594 937 ntBASIC21■□□□□ 0.95
Atf3Q60765 Gm9794-201ENSMUST00000202370 423 ntBASIC21■□□□□ 0.95
Atf3Q60765 AC132467.2-202ENSMUST00000227726 559 ntBASIC21■□□□□ 0.95
Atf3Q60765 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Atf3Q60765 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Atf3Q60765 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC21■□□□□ 0.95
Atf3Q60765 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Atf3Q60765 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Atf3Q60765 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Atf3Q60765 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC21■□□□□ 0.95
Atf3Q60765 Syt7-205ENSMUST00000224135 1557 ntBASIC20.99■□□□□ 0.95
Atf3Q60765 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atf3Q60765 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atf3Q60765 Gm2810-201ENSMUST00000118681 990 ntBASIC20.99■□□□□ 0.95
Atf3Q60765 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC20.99■□□□□ 0.95
Atf3Q60765 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Atf3Q60765 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC20.99■□□□□ 0.95
Atf3Q60765 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.99■□□□□ 0.95
Atf3Q60765 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atf3Q60765 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Atf3Q60765 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.98■□□□□ 0.95
Atf3Q60765 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atf3Q60765 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
Atf3Q60765 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Atf3Q60765 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Atf3Q60765 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atf3Q60765 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atf3Q60765 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atf3Q60765 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Atf3Q60765 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atf3Q60765 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atf3Q60765 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Atf3Q60765 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC20.98■□□□□ 0.95
Atf3Q60765 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atf3Q60765 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Atf3Q60765 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atf3Q60765 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Atf3Q60765 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC20.97■□□□□ 0.95
Atf3Q60765 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Atf3Q60765 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Atf3Q60765 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC20.97■□□□□ 0.95
Atf3Q60765 Gm16215-201ENSMUST00000161990 637 ntBASIC20.97■□□□□ 0.95
Atf3Q60765 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms