Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shroom1Q5SX79 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shroom1Q5SX79 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Shroom1Q5SX79 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shroom1Q5SX79 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Shroom1Q5SX79 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shroom1Q5SX79 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Shroom1Q5SX79 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Shroom1Q5SX79 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.73■□□□□ 0.27
Shroom1Q5SX79 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.73■□□□□ 0.27
Shroom1Q5SX79 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.73■□□□□ 0.27
Shroom1Q5SX79 Gm27628-201ENSMUST00000184911 107 ntBASIC16.73■□□□□ 0.27
Shroom1Q5SX79 Gm2213-201ENSMUST00000197485 688 ntBASIC16.73■□□□□ 0.27
Shroom1Q5SX79 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.73■□□□□ 0.27
Shroom1Q5SX79 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.73■□□□□ 0.27
Shroom1Q5SX79 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Shroom1Q5SX79 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shroom1Q5SX79 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shroom1Q5SX79 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shroom1Q5SX79 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shroom1Q5SX79 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shroom1Q5SX79 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Shroom1Q5SX79 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.73■□□□□ 0.27
Shroom1Q5SX79 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shroom1Q5SX79 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shroom1Q5SX79 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.72■□□□□ 0.27
Shroom1Q5SX79 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.72■□□□□ 0.27
Shroom1Q5SX79 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shroom1Q5SX79 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Shroom1Q5SX79 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shroom1Q5SX79 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shroom1Q5SX79 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shroom1Q5SX79 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Shroom1Q5SX79 Gm11764-201ENSMUST00000120221 623 ntBASIC16.72■□□□□ 0.27
Shroom1Q5SX79 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.72■□□□□ 0.27
Shroom1Q5SX79 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.72■□□□□ 0.27
Shroom1Q5SX79 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.72■□□□□ 0.27
Shroom1Q5SX79 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Shroom1Q5SX79 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Shroom1Q5SX79 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shroom1Q5SX79 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shroom1Q5SX79 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Shroom1Q5SX79 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Shroom1Q5SX79 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Shroom1Q5SX79 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shroom1Q5SX79 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.72■□□□□ 0.27
Shroom1Q5SX79 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Shroom1Q5SX79 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Shroom1Q5SX79 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Shroom1Q5SX79 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.71■□□□□ 0.27
Shroom1Q5SX79 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.71■□□□□ 0.27
Shroom1Q5SX79 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Shroom1Q5SX79 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Shroom1Q5SX79 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Shroom1Q5SX79 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Shroom1Q5SX79 Gm11594-201ENSMUST00000122313 162 ntBASIC16.71■□□□□ 0.27
Shroom1Q5SX79 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Shroom1Q5SX79 Gm9727-201ENSMUST00000161387 555 ntBASIC16.71■□□□□ 0.27
Shroom1Q5SX79 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.71■□□□□ 0.27
Shroom1Q5SX79 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Shroom1Q5SX79 Gm18622-201ENSMUST00000219361 595 ntBASIC16.71■□□□□ 0.27
Shroom1Q5SX79 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Shroom1Q5SX79 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Shroom1Q5SX79 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Shroom1Q5SX79 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Shroom1Q5SX79 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Shroom1Q5SX79 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom1Q5SX79 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom1Q5SX79 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom1Q5SX79 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom1Q5SX79 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom1Q5SX79 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Shroom1Q5SX79 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom1Q5SX79 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom1Q5SX79 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom1Q5SX79 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom1Q5SX79 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom1Q5SX79 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Shroom1Q5SX79 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom1Q5SX79 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.7■□□□□ 0.26
Shroom1Q5SX79 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.7■□□□□ 0.26
Shroom1Q5SX79 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.7■□□□□ 0.26
Shroom1Q5SX79 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom1Q5SX79 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.7■□□□□ 0.26
Shroom1Q5SX79 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom1Q5SX79 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom1Q5SX79 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom1Q5SX79 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Shroom1Q5SX79 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom1Q5SX79 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Shroom1Q5SX79 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom1Q5SX79 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom1Q5SX79 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom1Q5SX79 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom1Q5SX79 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Shroom1Q5SX79 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shroom1Q5SX79 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shroom1Q5SX79 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shroom1Q5SX79 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Shroom1Q5SX79 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms