Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
R3hdm4Q4VBF2 Gm27646-201ENSMUST00000183989 110 ntBASIC16.97■□□□□ 0.31
R3hdm4Q4VBF2 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
R3hdm4Q4VBF2 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.97■□□□□ 0.31
R3hdm4Q4VBF2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.97■□□□□ 0.31
R3hdm4Q4VBF2 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.97■□□□□ 0.31
R3hdm4Q4VBF2 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.97■□□□□ 0.31
R3hdm4Q4VBF2 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
R3hdm4Q4VBF2 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
R3hdm4Q4VBF2 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.97■□□□□ 0.31
R3hdm4Q4VBF2 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
R3hdm4Q4VBF2 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
R3hdm4Q4VBF2 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
R3hdm4Q4VBF2 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.97■□□□□ 0.31
R3hdm4Q4VBF2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
R3hdm4Q4VBF2 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
R3hdm4Q4VBF2 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
R3hdm4Q4VBF2 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
R3hdm4Q4VBF2 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
R3hdm4Q4VBF2 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
R3hdm4Q4VBF2 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
R3hdm4Q4VBF2 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
R3hdm4Q4VBF2 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
R3hdm4Q4VBF2 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.96■□□□□ 0.31
R3hdm4Q4VBF2 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
R3hdm4Q4VBF2 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.96■□□□□ 0.31
R3hdm4Q4VBF2 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
R3hdm4Q4VBF2 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.96■□□□□ 0.31
R3hdm4Q4VBF2 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
R3hdm4Q4VBF2 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
R3hdm4Q4VBF2 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
R3hdm4Q4VBF2 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
R3hdm4Q4VBF2 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
R3hdm4Q4VBF2 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
R3hdm4Q4VBF2 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
R3hdm4Q4VBF2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
R3hdm4Q4VBF2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
R3hdm4Q4VBF2 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
R3hdm4Q4VBF2 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
R3hdm4Q4VBF2 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
R3hdm4Q4VBF2 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.95■□□□□ 0.3
R3hdm4Q4VBF2 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
R3hdm4Q4VBF2 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.95■□□□□ 0.3
R3hdm4Q4VBF2 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.95■□□□□ 0.3
R3hdm4Q4VBF2 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.95■□□□□ 0.3
R3hdm4Q4VBF2 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.95■□□□□ 0.3
R3hdm4Q4VBF2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
R3hdm4Q4VBF2 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
R3hdm4Q4VBF2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
R3hdm4Q4VBF2 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
R3hdm4Q4VBF2 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
R3hdm4Q4VBF2 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.95■□□□□ 0.3
R3hdm4Q4VBF2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
R3hdm4Q4VBF2 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
R3hdm4Q4VBF2 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
R3hdm4Q4VBF2 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
R3hdm4Q4VBF2 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.94■□□□□ 0.3
R3hdm4Q4VBF2 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
R3hdm4Q4VBF2 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
R3hdm4Q4VBF2 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
R3hdm4Q4VBF2 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.94■□□□□ 0.3
R3hdm4Q4VBF2 Gm6089-201ENSMUST00000197666 938 ntBASIC16.94■□□□□ 0.3
R3hdm4Q4VBF2 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
R3hdm4Q4VBF2 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.94■□□□□ 0.3
R3hdm4Q4VBF2 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.94■□□□□ 0.3
R3hdm4Q4VBF2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
R3hdm4Q4VBF2 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
R3hdm4Q4VBF2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
R3hdm4Q4VBF2 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
R3hdm4Q4VBF2 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
R3hdm4Q4VBF2 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
R3hdm4Q4VBF2 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
R3hdm4Q4VBF2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
R3hdm4Q4VBF2 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
R3hdm4Q4VBF2 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
R3hdm4Q4VBF2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
R3hdm4Q4VBF2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
R3hdm4Q4VBF2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
R3hdm4Q4VBF2 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
R3hdm4Q4VBF2 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
R3hdm4Q4VBF2 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
R3hdm4Q4VBF2 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
R3hdm4Q4VBF2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.93■□□□□ 0.3
R3hdm4Q4VBF2 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
R3hdm4Q4VBF2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.93■□□□□ 0.3
R3hdm4Q4VBF2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
R3hdm4Q4VBF2 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
R3hdm4Q4VBF2 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
R3hdm4Q4VBF2 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
R3hdm4Q4VBF2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
R3hdm4Q4VBF2 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
R3hdm4Q4VBF2 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
R3hdm4Q4VBF2 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
R3hdm4Q4VBF2 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
R3hdm4Q4VBF2 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.93■□□□□ 0.3
R3hdm4Q4VBF2 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
R3hdm4Q4VBF2 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
R3hdm4Q4VBF2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
R3hdm4Q4VBF2 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
R3hdm4Q4VBF2 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms