Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf38aQ4FK66 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf38aQ4FK66 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf38aQ4FK66 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf38aQ4FK66 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf38aQ4FK66 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.34■□□□□ 0.53
Prpf38aQ4FK66 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf38aQ4FK66 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Prpf38aQ4FK66 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Prpf38aQ4FK66 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf38aQ4FK66 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf38aQ4FK66 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf38aQ4FK66 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf38aQ4FK66 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Prpf38aQ4FK66 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.33■□□□□ 0.53
Prpf38aQ4FK66 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Prpf38aQ4FK66 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Prpf38aQ4FK66 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Prpf38aQ4FK66 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Prpf38aQ4FK66 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.33■□□□□ 0.53
Prpf38aQ4FK66 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Prpf38aQ4FK66 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf38aQ4FK66 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.33■□□□□ 0.52
Prpf38aQ4FK66 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf38aQ4FK66 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf38aQ4FK66 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.33■□□□□ 0.52
Prpf38aQ4FK66 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf38aQ4FK66 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf38aQ4FK66 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf38aQ4FK66 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf38aQ4FK66 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.33■□□□□ 0.52
Prpf38aQ4FK66 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Prpf38aQ4FK66 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf38aQ4FK66 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.33■□□□□ 0.52
Prpf38aQ4FK66 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf38aQ4FK66 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf38aQ4FK66 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf38aQ4FK66 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf38aQ4FK66 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf38aQ4FK66 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf38aQ4FK66 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf38aQ4FK66 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Prpf38aQ4FK66 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Prpf38aQ4FK66 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf38aQ4FK66 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.32■□□□□ 0.52
Prpf38aQ4FK66 Gm18489-201ENSMUST00000172565 551 ntBASIC18.32■□□□□ 0.52
Prpf38aQ4FK66 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf38aQ4FK66 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf38aQ4FK66 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf38aQ4FK66 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.32■□□□□ 0.52
Prpf38aQ4FK66 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf38aQ4FK66 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf38aQ4FK66 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf38aQ4FK66 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf38aQ4FK66 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
Prpf38aQ4FK66 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf38aQ4FK66 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf38aQ4FK66 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38aQ4FK66 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38aQ4FK66 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38aQ4FK66 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38aQ4FK66 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38aQ4FK66 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38aQ4FK66 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Prpf38aQ4FK66 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.31■□□□□ 0.52
Prpf38aQ4FK66 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.31■□□□□ 0.52
Prpf38aQ4FK66 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.31■□□□□ 0.52
Prpf38aQ4FK66 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38aQ4FK66 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.31■□□□□ 0.52
Prpf38aQ4FK66 Gm9682-201ENSMUST00000197505 556 ntBASIC18.31■□□□□ 0.52
Prpf38aQ4FK66 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.31■□□□□ 0.52
Prpf38aQ4FK66 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38aQ4FK66 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38aQ4FK66 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Prpf38aQ4FK66 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38aQ4FK66 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Prpf38aQ4FK66 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38aQ4FK66 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38aQ4FK66 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.31■□□□□ 0.52
Prpf38aQ4FK66 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Prpf38aQ4FK66 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38aQ4FK66 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38aQ4FK66 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38aQ4FK66 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38aQ4FK66 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38aQ4FK66 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38aQ4FK66 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38aQ4FK66 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38aQ4FK66 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf38aQ4FK66 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf38aQ4FK66 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf38aQ4FK66 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf38aQ4FK66 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf38aQ4FK66 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf38aQ4FK66 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Prpf38aQ4FK66 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Prpf38aQ4FK66 Gm27300-201ENSMUST00000184085 97 ntBASIC18.3■□□□□ 0.52
Prpf38aQ4FK66 Gm27335-201ENSMUST00000184758 97 ntBASIC18.3■□□□□ 0.52
Prpf38aQ4FK66 Gm2213-201ENSMUST00000197485 688 ntBASIC18.3■□□□□ 0.52
Prpf38aQ4FK66 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms