Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cks1brtQ3UNC9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cks1brtQ3UNC9 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cks1brtQ3UNC9 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cks1brtQ3UNC9 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cks1brtQ3UNC9 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cks1brtQ3UNC9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Cks1brtQ3UNC9 Gm42778-201ENSMUST00000199644 553 ntBASIC11.4□□□□□ -0.58
Cks1brtQ3UNC9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC11.4□□□□□ -0.58
Cks1brtQ3UNC9 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cks1brtQ3UNC9 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cks1brtQ3UNC9 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cks1brtQ3UNC9 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.4□□□□□ -0.58
Cks1brtQ3UNC9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Cks1brtQ3UNC9 AC174678.1-201ENSMUST00000228007 2749 ntBASIC11.4□□□□□ -0.58
Cks1brtQ3UNC9 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cks1brtQ3UNC9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC11.4□□□□□ -0.58
Cks1brtQ3UNC9 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cks1brtQ3UNC9 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cks1brtQ3UNC9 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Cks1brtQ3UNC9 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cks1brtQ3UNC9 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cks1brtQ3UNC9 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Cks1brtQ3UNC9 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cks1brtQ3UNC9 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cks1brtQ3UNC9 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cks1brtQ3UNC9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Cks1brtQ3UNC9 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Cks1brtQ3UNC9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC11.39□□□□□ -0.59
Cks1brtQ3UNC9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cks1brtQ3UNC9 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cks1brtQ3UNC9 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cks1brtQ3UNC9 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cks1brtQ3UNC9 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cks1brtQ3UNC9 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cks1brtQ3UNC9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC11.39□□□□□ -0.59
Cks1brtQ3UNC9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cks1brtQ3UNC9 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cks1brtQ3UNC9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cks1brtQ3UNC9 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Cks1brtQ3UNC9 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cks1brtQ3UNC9 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cks1brtQ3UNC9 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cks1brtQ3UNC9 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cks1brtQ3UNC9 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cks1brtQ3UNC9 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Cks1brtQ3UNC9 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cks1brtQ3UNC9 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cks1brtQ3UNC9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cks1brtQ3UNC9 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Cks1brtQ3UNC9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cks1brtQ3UNC9 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cks1brtQ3UNC9 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cks1brtQ3UNC9 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cks1brtQ3UNC9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Cks1brtQ3UNC9 Gm16425-201ENSMUST00000118143 3130 ntBASIC11.38□□□□□ -0.59
Cks1brtQ3UNC9 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cks1brtQ3UNC9 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cks1brtQ3UNC9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Cks1brtQ3UNC9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cks1brtQ3UNC9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cks1brtQ3UNC9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cks1brtQ3UNC9 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cks1brtQ3UNC9 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cks1brtQ3UNC9 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cks1brtQ3UNC9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cks1brtQ3UNC9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Cks1brtQ3UNC9 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cks1brtQ3UNC9 Gm45760-201ENSMUST00000212190 1782 ntBASIC11.38□□□□□ -0.59
Cks1brtQ3UNC9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cks1brtQ3UNC9 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cks1brtQ3UNC9 Gm37912-201ENSMUST00000191895 3076 ntBASIC11.38□□□□□ -0.59
Cks1brtQ3UNC9 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cks1brtQ3UNC9 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Cks1brtQ3UNC9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cks1brtQ3UNC9 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cks1brtQ3UNC9 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cks1brtQ3UNC9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cks1brtQ3UNC9 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cks1brtQ3UNC9 Flg-201ENSMUST00000050758 1488 ntBASIC11.38□□□□□ -0.59
Cks1brtQ3UNC9 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cks1brtQ3UNC9 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cks1brtQ3UNC9 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cks1brtQ3UNC9 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cks1brtQ3UNC9 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Cks1brtQ3UNC9 Gm13509-201ENSMUST00000119733 1308 ntBASIC11.37□□□□□ -0.59
Cks1brtQ3UNC9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Cks1brtQ3UNC9 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cks1brtQ3UNC9 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cks1brtQ3UNC9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cks1brtQ3UNC9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cks1brtQ3UNC9 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cks1brtQ3UNC9 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cks1brtQ3UNC9 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cks1brtQ3UNC9 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cks1brtQ3UNC9 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cks1brtQ3UNC9 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cks1brtQ3UNC9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Cks1brtQ3UNC9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cks1brtQ3UNC9 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms