Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 CT030684.1-201ENSMUST00000227292 914 ntBASIC20.29■□□□□ 0.84
Sf3b2Q3UJB0 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sf3b2Q3UJB0 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sf3b2Q3UJB0 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sf3b2Q3UJB0 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sf3b2Q3UJB0 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC20.29■□□□□ 0.84
Sf3b2Q3UJB0 Gm10154-201ENSMUST00000084445 354 ntBASIC20.29■□□□□ 0.84
Sf3b2Q3UJB0 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sf3b2Q3UJB0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sf3b2Q3UJB0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.29■□□□□ 0.84
Sf3b2Q3UJB0 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sf3b2Q3UJB0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Sf3b2Q3UJB0 Syt7-205ENSMUST00000224135 1557 ntBASIC20.29■□□□□ 0.84
Sf3b2Q3UJB0 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sf3b2Q3UJB0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Sf3b2Q3UJB0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sf3b2Q3UJB0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC20.28■□□□□ 0.84
Sf3b2Q3UJB0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sf3b2Q3UJB0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sf3b2Q3UJB0 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sf3b2Q3UJB0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sf3b2Q3UJB0 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sf3b2Q3UJB0 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sf3b2Q3UJB0 Gm8410-201ENSMUST00000117225 605 ntBASIC20.28■□□□□ 0.84
Sf3b2Q3UJB0 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC20.28■□□□□ 0.84
Sf3b2Q3UJB0 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC20.28■□□□□ 0.84
Sf3b2Q3UJB0 Gm6888-201ENSMUST00000221983 706 ntBASIC20.28■□□□□ 0.84
Sf3b2Q3UJB0 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC20.28■□□□□ 0.84
Sf3b2Q3UJB0 AC125350.2-201ENSMUST00000224737 727 ntBASIC20.28■□□□□ 0.84
Sf3b2Q3UJB0 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Sf3b2Q3UJB0 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sf3b2Q3UJB0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC20.28■□□□□ 0.84
Sf3b2Q3UJB0 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sf3b2Q3UJB0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sf3b2Q3UJB0 AC124751.1-201ENSMUST00000222716 1408 ntBASIC20.27■□□□□ 0.84
Sf3b2Q3UJB0 Gm5184-201ENSMUST00000220417 1702 ntBASIC20.27■□□□□ 0.84
Sf3b2Q3UJB0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sf3b2Q3UJB0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Sf3b2Q3UJB0 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Sf3b2Q3UJB0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sf3b2Q3UJB0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sf3b2Q3UJB0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sf3b2Q3UJB0 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
Sf3b2Q3UJB0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sf3b2Q3UJB0 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC20.27■□□□□ 0.84
Sf3b2Q3UJB0 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sf3b2Q3UJB0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sf3b2Q3UJB0 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC20.27■□□□□ 0.84
Sf3b2Q3UJB0 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sf3b2Q3UJB0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sf3b2Q3UJB0 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Sf3b2Q3UJB0 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sf3b2Q3UJB0 Gm12490-201ENSMUST00000120255 560 ntBASIC20.26■□□□□ 0.83
Sf3b2Q3UJB0 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC20.26■□□□□ 0.83
Sf3b2Q3UJB0 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Sf3b2Q3UJB0 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC20.26■□□□□ 0.83
Sf3b2Q3UJB0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sf3b2Q3UJB0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Sf3b2Q3UJB0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC20.26■□□□□ 0.83
Sf3b2Q3UJB0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sf3b2Q3UJB0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.26■□□□□ 0.83
Sf3b2Q3UJB0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sf3b2Q3UJB0 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sf3b2Q3UJB0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sf3b2Q3UJB0 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sf3b2Q3UJB0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sf3b2Q3UJB0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sf3b2Q3UJB0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sf3b2Q3UJB0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sf3b2Q3UJB0 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Sf3b2Q3UJB0 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Sf3b2Q3UJB0 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC20.25■□□□□ 0.83
Sf3b2Q3UJB0 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC20.25■□□□□ 0.83
Sf3b2Q3UJB0 Gm16215-201ENSMUST00000161990 637 ntBASIC20.25■□□□□ 0.83
Sf3b2Q3UJB0 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Sf3b2Q3UJB0 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC20.25■□□□□ 0.83
Sf3b2Q3UJB0 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC20.25■□□□□ 0.83
Sf3b2Q3UJB0 Gm2272-201ENSMUST00000194903 582 ntBASIC20.25■□□□□ 0.83
Sf3b2Q3UJB0 Gm44855-201ENSMUST00000205725 362 ntBASIC20.25■□□□□ 0.83
Sf3b2Q3UJB0 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
Sf3b2Q3UJB0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sf3b2Q3UJB0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sf3b2Q3UJB0 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sf3b2Q3UJB0 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sf3b2Q3UJB0 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Sf3b2Q3UJB0 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sf3b2Q3UJB0 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sf3b2Q3UJB0 AC166341.4-201ENSMUST00000220625 123 ntBASIC20.24■□□□□ 0.83
Sf3b2Q3UJB0 AC130829.1-201ENSMUST00000221548 494 ntBASIC20.24■□□□□ 0.83
Sf3b2Q3UJB0 Rbfox2-208ENSMUST00000227930 1218 ntBASIC20.24■□□□□ 0.83
Sf3b2Q3UJB0 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sf3b2Q3UJB0 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sf3b2Q3UJB0 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sf3b2Q3UJB0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sf3b2Q3UJB0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sf3b2Q3UJB0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sf3b2Q3UJB0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sf3b2Q3UJB0 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sf3b2Q3UJB0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sf3b2Q3UJB0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms