Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Gm8825-201ENSMUST00000182565 998 ntBASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Gm4518-201ENSMUST00000182638 718 ntBASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Gm44357-201ENSMUST00000195897 142 ntBASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Gm19658-201ENSMUST00000196231 138 ntBASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Gm44367-201ENSMUST00000196836 138 ntBASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Gm44350-201ENSMUST00000197197 138 ntBASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Gm44390-201ENSMUST00000197533 144 ntBASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Gm44313-201ENSMUST00000198018 138 ntBASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Gm44486-201ENSMUST00000198508 138 ntBASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Gm44314-201ENSMUST00000199263 138 ntBASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Gm44394-201ENSMUST00000199558 138 ntBASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Gm44484-201ENSMUST00000199873 138 ntBASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Gm44466-201ENSMUST00000200264 138 ntBASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Gm44359-201ENSMUST00000200671 138 ntBASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf44Q3UHJ8 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf44Q3UHJ8 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
Rnf44Q3UHJ8 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf44Q3UHJ8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Rnf44Q3UHJ8 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf44Q3UHJ8 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Rnf44Q3UHJ8 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf44Q3UHJ8 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf44Q3UHJ8 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.19■□□□□ 0.02
Rnf44Q3UHJ8 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf44Q3UHJ8 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf44Q3UHJ8 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf44Q3UHJ8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf44Q3UHJ8 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf44Q3UHJ8 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rnf44Q3UHJ8 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf44Q3UHJ8 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.19■□□□□ 0.02
Rnf44Q3UHJ8 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.19■□□□□ 0.02
Rnf44Q3UHJ8 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.19■□□□□ 0.02
Rnf44Q3UHJ8 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.19■□□□□ 0.02
Rnf44Q3UHJ8 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rnf44Q3UHJ8 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf44Q3UHJ8 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.19■□□□□ 0.02
Rnf44Q3UHJ8 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf44Q3UHJ8 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf44Q3UHJ8 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf44Q3UHJ8 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf44Q3UHJ8 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf44Q3UHJ8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf44Q3UHJ8 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf44Q3UHJ8 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf44Q3UHJ8 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.18■□□□□ 0.02
Rnf44Q3UHJ8 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf44Q3UHJ8 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf44Q3UHJ8 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf44Q3UHJ8 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Rnf44Q3UHJ8 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf44Q3UHJ8 Gm8097-201ENSMUST00000117903 829 ntBASIC15.18■□□□□ 0.02
Rnf44Q3UHJ8 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Rnf44Q3UHJ8 Gm27741-201ENSMUST00000185060 237 ntBASIC15.18■□□□□ 0.02
Rnf44Q3UHJ8 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf44Q3UHJ8 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.18■□□□□ 0.02
Rnf44Q3UHJ8 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf44Q3UHJ8 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.18■□□□□ 0.02
Rnf44Q3UHJ8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms