Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Brf2Q3UAW9 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Brf2Q3UAW9 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brf2Q3UAW9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Brf2Q3UAW9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brf2Q3UAW9 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brf2Q3UAW9 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brf2Q3UAW9 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brf2Q3UAW9 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brf2Q3UAW9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brf2Q3UAW9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brf2Q3UAW9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brf2Q3UAW9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Brf2Q3UAW9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brf2Q3UAW9 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brf2Q3UAW9 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brf2Q3UAW9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brf2Q3UAW9 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Brf2Q3UAW9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.84□□□□□ -0.03
Brf2Q3UAW9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brf2Q3UAW9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brf2Q3UAW9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Brf2Q3UAW9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.84□□□□□ -0.03
Brf2Q3UAW9 Gm27742-201ENSMUST00000184667 60 ntBASIC14.84□□□□□ -0.03
Brf2Q3UAW9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.84□□□□□ -0.03
Brf2Q3UAW9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brf2Q3UAW9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Brf2Q3UAW9 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Brf2Q3UAW9 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.84□□□□□ -0.03
Brf2Q3UAW9 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Brf2Q3UAW9 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brf2Q3UAW9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Brf2Q3UAW9 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brf2Q3UAW9 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brf2Q3UAW9 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brf2Q3UAW9 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brf2Q3UAW9 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
Brf2Q3UAW9 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.83□□□□□ -0.03
Brf2Q3UAW9 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Brf2Q3UAW9 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Brf2Q3UAW9 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Brf2Q3UAW9 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Brf2Q3UAW9 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Brf2Q3UAW9 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Brf2Q3UAW9 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Brf2Q3UAW9 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Brf2Q3UAW9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Brf2Q3UAW9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Brf2Q3UAW9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Brf2Q3UAW9 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Brf2Q3UAW9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Brf2Q3UAW9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Brf2Q3UAW9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Brf2Q3UAW9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Brf2Q3UAW9 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Brf2Q3UAW9 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.83□□□□□ -0.04
Brf2Q3UAW9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Brf2Q3UAW9 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Brf2Q3UAW9 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.83□□□□□ -0.04
Brf2Q3UAW9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Brf2Q3UAW9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Brf2Q3UAW9 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Brf2Q3UAW9 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Brf2Q3UAW9 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brf2Q3UAW9 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brf2Q3UAW9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Brf2Q3UAW9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brf2Q3UAW9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Brf2Q3UAW9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Brf2Q3UAW9 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Brf2Q3UAW9 Olfr129-201ENSMUST00000122318 993 ntBASIC14.82□□□□□ -0.04
Brf2Q3UAW9 Gm25406-201ENSMUST00000157599 105 ntBASIC14.82□□□□□ -0.04
Brf2Q3UAW9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brf2Q3UAW9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.82□□□□□ -0.04
Brf2Q3UAW9 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Brf2Q3UAW9 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Brf2Q3UAW9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.82□□□□□ -0.04
Brf2Q3UAW9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brf2Q3UAW9 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brf2Q3UAW9 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brf2Q3UAW9 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brf2Q3UAW9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brf2Q3UAW9 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Brf2Q3UAW9 App-207ENSMUST00000227737 2827 ntBASIC14.82□□□□□ -0.04
Brf2Q3UAW9 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Brf2Q3UAW9 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Brf2Q3UAW9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf2Q3UAW9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf2Q3UAW9 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Brf2Q3UAW9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf2Q3UAW9 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf2Q3UAW9 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Brf2Q3UAW9 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf2Q3UAW9 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf2Q3UAW9 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Brf2Q3UAW9 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Brf2Q3UAW9 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.81□□□□□ -0.04
Brf2Q3UAW9 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf2Q3UAW9 Mir3081-201ENSMUST00000175305 84 ntBASIC14.81□□□□□ -0.04
Brf2Q3UAW9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms