Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cops9Q3U898 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC10.82□□□□□ -0.68
Cops9Q3U898 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC10.82□□□□□ -0.68
Cops9Q3U898 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cops9Q3U898 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cops9Q3U898 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cops9Q3U898 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cops9Q3U898 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cops9Q3U898 App-207ENSMUST00000227737 2827 ntBASIC10.82□□□□□ -0.68
Cops9Q3U898 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cops9Q3U898 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cops9Q3U898 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Cops9Q3U898 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cops9Q3U898 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cops9Q3U898 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cops9Q3U898 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cops9Q3U898 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cops9Q3U898 Rbfox2-206ENSMUST00000227314 1810 ntBASIC10.82□□□□□ -0.68
Cops9Q3U898 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cops9Q3U898 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC10.82□□□□□ -0.68
Cops9Q3U898 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cops9Q3U898 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cops9Q3U898 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC10.82□□□□□ -0.68
Cops9Q3U898 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Cops9Q3U898 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cops9Q3U898 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cops9Q3U898 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cops9Q3U898 Gm24841-201ENSMUST00000158676 357 ntBASIC10.82□□□□□ -0.68
Cops9Q3U898 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC10.82□□□□□ -0.68
Cops9Q3U898 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cops9Q3U898 Gm18958-201ENSMUST00000174258 762 ntBASIC10.82□□□□□ -0.68
Cops9Q3U898 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cops9Q3U898 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC10.82□□□□□ -0.68
Cops9Q3U898 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC10.82□□□□□ -0.68
Cops9Q3U898 Gm21168-201ENSMUST00000199646 1096 ntBASIC10.82□□□□□ -0.68
Cops9Q3U898 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cops9Q3U898 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cops9Q3U898 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cops9Q3U898 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Cops9Q3U898 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cops9Q3U898 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cops9Q3U898 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cops9Q3U898 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cops9Q3U898 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cops9Q3U898 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Cops9Q3U898 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cops9Q3U898 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cops9Q3U898 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC10.82□□□□□ -0.68
Cops9Q3U898 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cops9Q3U898 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cops9Q3U898 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cops9Q3U898 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cops9Q3U898 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cops9Q3U898 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cops9Q3U898 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cops9Q3U898 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cops9Q3U898 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cops9Q3U898 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cops9Q3U898 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cops9Q3U898 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cops9Q3U898 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Cops9Q3U898 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cops9Q3U898 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cops9Q3U898 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cops9Q3U898 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cops9Q3U898 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Cops9Q3U898 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cops9Q3U898 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Cops9Q3U898 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Cops9Q3U898 Gm5297-201ENSMUST00000198555 1171 ntBASIC10.81□□□□□ -0.68
Cops9Q3U898 Gm7291-201ENSMUST00000199147 382 ntBASIC10.81□□□□□ -0.68
Cops9Q3U898 Gm6365-201ENSMUST00000054711 744 ntBASIC10.81□□□□□ -0.68
Cops9Q3U898 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cops9Q3U898 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cops9Q3U898 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cops9Q3U898 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cops9Q3U898 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cops9Q3U898 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Cops9Q3U898 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC10.81□□□□□ -0.68
Cops9Q3U898 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cops9Q3U898 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cops9Q3U898 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cops9Q3U898 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Cops9Q3U898 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Cops9Q3U898 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cops9Q3U898 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cops9Q3U898 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cops9Q3U898 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cops9Q3U898 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cops9Q3U898 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cops9Q3U898 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Cops9Q3U898 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Cops9Q3U898 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cops9Q3U898 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cops9Q3U898 Gm45546-201ENSMUST00000211053 2394 ntBASIC10.8□□□□□ -0.68
Cops9Q3U898 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cops9Q3U898 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cops9Q3U898 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cops9Q3U898 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cops9Q3U898 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms