Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trpm1Q2TV84 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Trpm1Q2TV84 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC22.17■■□□□ 1.14
Trpm1Q2TV84 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trpm1Q2TV84 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trpm1Q2TV84 Gm13517-201ENSMUST00000120782 1495 ntBASIC22.16■■□□□ 1.14
Trpm1Q2TV84 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trpm1Q2TV84 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Trpm1Q2TV84 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Trpm1Q2TV84 Gm45293-201ENSMUST00000209754 1812 ntBASIC22.16■■□□□ 1.14
Trpm1Q2TV84 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trpm1Q2TV84 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trpm1Q2TV84 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Trpm1Q2TV84 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC22.16■■□□□ 1.14
Trpm1Q2TV84 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trpm1Q2TV84 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Trpm1Q2TV84 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Trpm1Q2TV84 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC22.16■■□□□ 1.14
Trpm1Q2TV84 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC22.16■■□□□ 1.14
Trpm1Q2TV84 Gm15483-201ENSMUST00000120338 456 ntBASIC22.16■■□□□ 1.14
Trpm1Q2TV84 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Trpm1Q2TV84 Gm9794-201ENSMUST00000202370 423 ntBASIC22.16■■□□□ 1.14
Trpm1Q2TV84 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trpm1Q2TV84 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Trpm1Q2TV84 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trpm1Q2TV84 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trpm1Q2TV84 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trpm1Q2TV84 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trpm1Q2TV84 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Trpm1Q2TV84 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC22.15■■□□□ 1.14
Trpm1Q2TV84 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trpm1Q2TV84 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trpm1Q2TV84 Gm6912-201ENSMUST00000117218 544 ntBASIC22.15■■□□□ 1.14
Trpm1Q2TV84 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC22.15■■□□□ 1.14
Trpm1Q2TV84 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC22.15■■□□□ 1.14
Trpm1Q2TV84 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Trpm1Q2TV84 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trpm1Q2TV84 Gm8597-201ENSMUST00000191525 1109 ntBASIC22.15■■□□□ 1.14
Trpm1Q2TV84 Gm44344-201ENSMUST00000200287 129 ntBASIC22.15■■□□□ 1.14
Trpm1Q2TV84 AC135669.1-201ENSMUST00000213585 412 ntBASIC22.15■■□□□ 1.14
Trpm1Q2TV84 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trpm1Q2TV84 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trpm1Q2TV84 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trpm1Q2TV84 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Trpm1Q2TV84 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC22.14■■□□□ 1.14
Trpm1Q2TV84 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
Trpm1Q2TV84 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Trpm1Q2TV84 Gm15321-201ENSMUST00000121290 288 ntBASIC22.14■■□□□ 1.14
Trpm1Q2TV84 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
Trpm1Q2TV84 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Trpm1Q2TV84 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
Trpm1Q2TV84 Klk2-ps-201ENSMUST00000205342 571 ntBASIC22.14■■□□□ 1.14
Trpm1Q2TV84 Gm18049-201ENSMUST00000208909 581 ntBASIC22.14■■□□□ 1.14
Trpm1Q2TV84 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
Trpm1Q2TV84 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Trpm1Q2TV84 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Trpm1Q2TV84 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC22.14■■□□□ 1.13
Trpm1Q2TV84 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trpm1Q2TV84 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Trpm1Q2TV84 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC22.14■■□□□ 1.13
Trpm1Q2TV84 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Trpm1Q2TV84 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Trpm1Q2TV84 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Trpm1Q2TV84 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC22.13■■□□□ 1.13
Trpm1Q2TV84 AC124732.1-201ENSMUST00000221551 910 ntBASIC22.13■■□□□ 1.13
Trpm1Q2TV84 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trpm1Q2TV84 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trpm1Q2TV84 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trpm1Q2TV84 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Trpm1Q2TV84 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC22.13■■□□□ 1.13
Trpm1Q2TV84 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trpm1Q2TV84 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trpm1Q2TV84 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trpm1Q2TV84 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trpm1Q2TV84 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trpm1Q2TV84 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trpm1Q2TV84 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trpm1Q2TV84 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Trpm1Q2TV84 Syt7-204ENSMUST00000223586 1344 ntBASIC22.12■■□□□ 1.13
Trpm1Q2TV84 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trpm1Q2TV84 Gm14026-201ENSMUST00000120625 1789 ntBASIC22.12■■□□□ 1.13
Trpm1Q2TV84 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trpm1Q2TV84 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trpm1Q2TV84 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Trpm1Q2TV84 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trpm1Q2TV84 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trpm1Q2TV84 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Trpm1Q2TV84 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Trpm1Q2TV84 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Trpm1Q2TV84 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trpm1Q2TV84 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trpm1Q2TV84 Gm27989-201ENSMUST00000184721 107 ntBASIC22.11■■□□□ 1.13
Trpm1Q2TV84 Gm18766-201ENSMUST00000189811 808 ntBASIC22.11■■□□□ 1.13
Trpm1Q2TV84 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC22.11■■□□□ 1.13
Trpm1Q2TV84 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trpm1Q2TV84 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trpm1Q2TV84 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Trpm1Q2TV84 Gm8096-201ENSMUST00000209921 1591 ntBASIC22.11■■□□□ 1.13
Trpm1Q2TV84 Gm38327-201ENSMUST00000195852 1755 ntBASIC22.11■■□□□ 1.13
Trpm1Q2TV84 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms