Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ptchd3Q0EEE2 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptchd3Q0EEE2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptchd3Q0EEE2 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.23■□□□□ 0.03
Ptchd3Q0EEE2 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptchd3Q0EEE2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptchd3Q0EEE2 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.23■□□□□ 0.03
Ptchd3Q0EEE2 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ptchd3Q0EEE2 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptchd3Q0EEE2 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ptchd3Q0EEE2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.23■□□□□ 0.03
Ptchd3Q0EEE2 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptchd3Q0EEE2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptchd3Q0EEE2 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Ptchd3Q0EEE2 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptchd3Q0EEE2 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptchd3Q0EEE2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptchd3Q0EEE2 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ptchd3Q0EEE2 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ptchd3Q0EEE2 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.23■□□□□ 0.03
Ptchd3Q0EEE2 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptchd3Q0EEE2 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Ptchd3Q0EEE2 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptchd3Q0EEE2 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptchd3Q0EEE2 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptchd3Q0EEE2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ptchd3Q0EEE2 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptchd3Q0EEE2 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Ptchd3Q0EEE2 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptchd3Q0EEE2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ptchd3Q0EEE2 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptchd3Q0EEE2 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptchd3Q0EEE2 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ptchd3Q0EEE2 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptchd3Q0EEE2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptchd3Q0EEE2 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ptchd3Q0EEE2 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.22■□□□□ 0.03
Ptchd3Q0EEE2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptchd3Q0EEE2 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptchd3Q0EEE2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ptchd3Q0EEE2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptchd3Q0EEE2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ptchd3Q0EEE2 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptchd3Q0EEE2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ptchd3Q0EEE2 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptchd3Q0EEE2 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Ptchd3Q0EEE2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ptchd3Q0EEE2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.22■□□□□ 0.03
Ptchd3Q0EEE2 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.22■□□□□ 0.03
Ptchd3Q0EEE2 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.22■□□□□ 0.03
Ptchd3Q0EEE2 Mir1668-201ENSMUST00000184114 107 ntBASIC15.22■□□□□ 0.03
Ptchd3Q0EEE2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.22■□□□□ 0.03
Ptchd3Q0EEE2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Ptchd3Q0EEE2 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptchd3Q0EEE2 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.22■□□□□ 0.03
Ptchd3Q0EEE2 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ptchd3Q0EEE2 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptchd3Q0EEE2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptchd3Q0EEE2 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ptchd3Q0EEE2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptchd3Q0EEE2 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptchd3Q0EEE2 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptchd3Q0EEE2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ptchd3Q0EEE2 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
Ptchd3Q0EEE2 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptchd3Q0EEE2 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ptchd3Q0EEE2 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ptchd3Q0EEE2 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms