Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Hspg2Q05793 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hspg2Q05793 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hspg2Q05793 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hspg2Q05793 Gm9899-201ENSMUST00000065519 555 ntBASIC11.5□□□□□ -0.57
Hspg2Q05793 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hspg2Q05793 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hspg2Q05793 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hspg2Q05793 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hspg2Q05793 AC121598.2-201ENSMUST00000228376 2325 ntBASIC11.49□□□□□ -0.57
Hspg2Q05793 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hspg2Q05793 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hspg2Q05793 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hspg2Q05793 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hspg2Q05793 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hspg2Q05793 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC11.49□□□□□ -0.57
Hspg2Q05793 Gm15487-201ENSMUST00000122373 465 ntBASIC11.49□□□□□ -0.57
Hspg2Q05793 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.49□□□□□ -0.57
Hspg2Q05793 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hspg2Q05793 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hspg2Q05793 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC11.49□□□□□ -0.57
Hspg2Q05793 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Hspg2Q05793 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hspg2Q05793 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC11.49□□□□□ -0.57
Hspg2Q05793 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hspg2Q05793 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hspg2Q05793 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hspg2Q05793 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hspg2Q05793 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC11.49□□□□□ -0.57
Hspg2Q05793 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hspg2Q05793 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hspg2Q05793 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hspg2Q05793 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC11.49□□□□□ -0.57
Hspg2Q05793 CT025555.1-201ENSMUST00000225901 1217 ntBASIC11.49□□□□□ -0.57
Hspg2Q05793 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.49□□□□□ -0.57
Hspg2Q05793 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hspg2Q05793 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Hspg2Q05793 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hspg2Q05793 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hspg2Q05793 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hspg2Q05793 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hspg2Q05793 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hspg2Q05793 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hspg2Q05793 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC11.48□□□□□ -0.57
Hspg2Q05793 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.48□□□□□ -0.57
Hspg2Q05793 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hspg2Q05793 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hspg2Q05793 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hspg2Q05793 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC11.48□□□□□ -0.57
Hspg2Q05793 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Hspg2Q05793 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hspg2Q05793 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Hspg2Q05793 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hspg2Q05793 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hspg2Q05793 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hspg2Q05793 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.48□□□□□ -0.57
Hspg2Q05793 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Hspg2Q05793 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hspg2Q05793 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hspg2Q05793 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hspg2Q05793 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hspg2Q05793 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hspg2Q05793 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Hspg2Q05793 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Hspg2Q05793 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hspg2Q05793 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hspg2Q05793 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hspg2Q05793 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hspg2Q05793 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hspg2Q05793 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hspg2Q05793 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.48□□□□□ -0.57
Hspg2Q05793 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hspg2Q05793 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hspg2Q05793 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hspg2Q05793 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hspg2Q05793 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Hspg2Q05793 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Hspg2Q05793 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Hspg2Q05793 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hspg2Q05793 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hspg2Q05793 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hspg2Q05793 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hspg2Q05793 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.47□□□□□ -0.57
Hspg2Q05793 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hspg2Q05793 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC11.47□□□□□ -0.57
Hspg2Q05793 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11.47□□□□□ -0.57
Hspg2Q05793 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hspg2Q05793 Gm28630-201ENSMUST00000187806 498 ntBASIC11.47□□□□□ -0.57
Hspg2Q05793 Gm18766-201ENSMUST00000189811 808 ntBASIC11.47□□□□□ -0.57
Hspg2Q05793 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.47□□□□□ -0.57
Hspg2Q05793 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hspg2Q05793 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hspg2Q05793 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hspg2Q05793 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hspg2Q05793 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Hspg2Q05793 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hspg2Q05793 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hspg2Q05793 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hspg2Q05793 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.47□□□□□ -0.57
Hspg2Q05793 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms