Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.02□□□□□ -0.17
H3f3aP84244 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H3f3aP84244 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.02□□□□□ -0.17
H3f3aP84244 Gm24589-201ENSMUST00000116692 94 ntBASIC14.02□□□□□ -0.17
H3f3aP84244 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.02□□□□□ -0.17
H3f3aP84244 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.02□□□□□ -0.17
H3f3aP84244 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.02□□□□□ -0.17
H3f3aP84244 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
H3f3aP84244 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
H3f3aP84244 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H3f3aP84244 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
H3f3aP84244 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
H3f3aP84244 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
H3f3aP84244 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H3f3aP84244 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.02□□□□□ -0.17
H3f3aP84244 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
H3f3aP84244 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H3f3aP84244 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3aP84244 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3aP84244 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3aP84244 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3aP84244 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3aP84244 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
H3f3aP84244 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3aP84244 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3aP84244 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.01□□□□□ -0.17
H3f3aP84244 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3aP84244 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3aP84244 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
H3f3aP84244 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3aP84244 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3aP84244 Gm7153-201ENSMUST00000117092 455 ntBASIC14.01□□□□□ -0.17
H3f3aP84244 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
H3f3aP84244 Gm43347-201ENSMUST00000200226 580 ntBASIC14.01□□□□□ -0.17
H3f3aP84244 Gm8655-201ENSMUST00000221159 852 ntBASIC14.01□□□□□ -0.17
H3f3aP84244 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3aP84244 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.01□□□□□ -0.17
H3f3aP84244 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3aP84244 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
H3f3aP84244 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3aP84244 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3aP84244 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.01□□□□□ -0.17
H3f3aP84244 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3aP84244 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
H3f3aP84244 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3aP84244 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3f3aP84244 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3f3aP84244 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
H3f3aP84244 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
H3f3aP84244 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3f3aP84244 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3f3aP84244 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
H3f3aP84244 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
H3f3aP84244 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
H3f3aP84244 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3f3aP84244 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
H3f3aP84244 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
H3f3aP84244 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
H3f3aP84244 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14□□□□□ -0.17
H3f3aP84244 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
H3f3aP84244 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
H3f3aP84244 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
H3f3aP84244 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14□□□□□ -0.17
H3f3aP84244 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14□□□□□ -0.17
H3f3aP84244 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14□□□□□ -0.17
H3f3aP84244 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14□□□□□ -0.17
H3f3aP84244 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14□□□□□ -0.17
H3f3aP84244 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3f3aP84244 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
H3f3aP84244 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
H3f3aP84244 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3f3aP84244 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14□□□□□ -0.17
H3f3aP84244 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14□□□□□ -0.17
H3f3aP84244 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3f3aP84244 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3f3aP84244 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
H3f3aP84244 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
H3f3aP84244 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14□□□□□ -0.17
H3f3aP84244 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H3f3aP84244 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H3f3aP84244 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H3f3aP84244 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H3f3aP84244 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
H3f3aP84244 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H3f3aP84244 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H3f3aP84244 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
H3f3aP84244 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.99□□□□□ -0.17
H3f3aP84244 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
H3f3aP84244 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.99□□□□□ -0.17
H3f3aP84244 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
H3f3aP84244 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
H3f3aP84244 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
H3f3aP84244 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
H3f3aP84244 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
H3f3aP84244 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.99□□□□□ -0.17
H3f3aP84244 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.99□□□□□ -0.17
H3f3aP84244 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.99□□□□□ -0.17
H3f3aP84244 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
H3f3aP84244 Gm18622-201ENSMUST00000219361 595 ntBASIC13.99□□□□□ -0.17
H3f3aP84244 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms