Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SgcaP82350 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SgcaP82350 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SgcaP82350 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SgcaP82350 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SgcaP82350 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SgcaP82350 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.23□□□□□ -0.29
SgcaP82350 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
SgcaP82350 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SgcaP82350 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
SgcaP82350 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SgcaP82350 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.23□□□□□ -0.29
SgcaP82350 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SgcaP82350 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.23□□□□□ -0.29
SgcaP82350 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SgcaP82350 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.23□□□□□ -0.29
SgcaP82350 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SgcaP82350 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.23□□□□□ -0.29
SgcaP82350 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SgcaP82350 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SgcaP82350 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SgcaP82350 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SgcaP82350 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SgcaP82350 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SgcaP82350 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SgcaP82350 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SgcaP82350 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SgcaP82350 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.23□□□□□ -0.29
SgcaP82350 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SgcaP82350 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SgcaP82350 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SgcaP82350 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SgcaP82350 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.22□□□□□ -0.29
SgcaP82350 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SgcaP82350 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SgcaP82350 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SgcaP82350 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SgcaP82350 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SgcaP82350 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SgcaP82350 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SgcaP82350 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SgcaP82350 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.22□□□□□ -0.29
SgcaP82350 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.22□□□□□ -0.29
SgcaP82350 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SgcaP82350 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.22□□□□□ -0.29
SgcaP82350 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SgcaP82350 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SgcaP82350 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SgcaP82350 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SgcaP82350 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
SgcaP82350 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.22□□□□□ -0.29
SgcaP82350 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SgcaP82350 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.22□□□□□ -0.29
SgcaP82350 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SgcaP82350 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
SgcaP82350 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SgcaP82350 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SgcaP82350 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SgcaP82350 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SgcaP82350 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SgcaP82350 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SgcaP82350 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SgcaP82350 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SgcaP82350 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SgcaP82350 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SgcaP82350 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SgcaP82350 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SgcaP82350 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
SgcaP82350 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SgcaP82350 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SgcaP82350 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SgcaP82350 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC13.21□□□□□ -0.29
SgcaP82350 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.21□□□□□ -0.29
SgcaP82350 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SgcaP82350 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SgcaP82350 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SgcaP82350 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
SgcaP82350 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SgcaP82350 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
SgcaP82350 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
SgcaP82350 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SgcaP82350 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
SgcaP82350 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcaP82350 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcaP82350 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcaP82350 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.2□□□□□ -0.3
SgcaP82350 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcaP82350 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.2□□□□□ -0.3
SgcaP82350 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcaP82350 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SgcaP82350 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SgcaP82350 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SgcaP82350 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcaP82350 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcaP82350 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SgcaP82350 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcaP82350 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcaP82350 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SgcaP82350 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SgcaP82350 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms