Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a1P61620 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a1P61620 Gm11355-201ENSMUST00000121120 306 ntBASIC13.9□□□□□ -0.18
Sec61a1P61620 Gm9013-201ENSMUST00000132939 882 ntBASIC13.9□□□□□ -0.18
Sec61a1P61620 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.9□□□□□ -0.18
Sec61a1P61620 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.9□□□□□ -0.18
Sec61a1P61620 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.9□□□□□ -0.18
Sec61a1P61620 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a1P61620 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.9□□□□□ -0.18
Sec61a1P61620 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a1P61620 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a1P61620 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a1P61620 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a1P61620 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a1P61620 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a1P61620 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a1P61620 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a1P61620 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a1P61620 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sec61a1P61620 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Sec61a1P61620 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Sec61a1P61620 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a1P61620 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a1P61620 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a1P61620 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a1P61620 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a1P61620 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.89□□□□□ -0.19
Sec61a1P61620 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a1P61620 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a1P61620 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a1P61620 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Sec61a1P61620 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.89□□□□□ -0.19
Sec61a1P61620 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a1P61620 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Sec61a1P61620 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.89□□□□□ -0.19
Sec61a1P61620 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a1P61620 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a1P61620 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a1P61620 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a1P61620 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a1P61620 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a1P61620 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a1P61620 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Sec61a1P61620 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a1P61620 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sec61a1P61620 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a1P61620 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Sec61a1P61620 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a1P61620 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a1P61620 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a1P61620 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Sec61a1P61620 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Sec61a1P61620 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a1P61620 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Sec61a1P61620 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a1P61620 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.88□□□□□ -0.19
Sec61a1P61620 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.88□□□□□ -0.19
Sec61a1P61620 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Sec61a1P61620 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Sec61a1P61620 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Sec61a1P61620 Gm29518-201ENSMUST00000190858 372 ntBASIC13.88□□□□□ -0.19
Sec61a1P61620 Gm37722-201ENSMUST00000193757 208 ntBASIC13.88□□□□□ -0.19
Sec61a1P61620 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Sec61a1P61620 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a1P61620 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a1P61620 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Sec61a1P61620 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Sec61a1P61620 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a1P61620 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a1P61620 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a1P61620 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a1P61620 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a1P61620 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a1P61620 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Sec61a1P61620 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.88□□□□□ -0.19
Sec61a1P61620 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Sec61a1P61620 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a1P61620 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a1P61620 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a1P61620 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a1P61620 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a1P61620 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sec61a1P61620 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sec61a1P61620 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.87□□□□□ -0.19
Sec61a1P61620 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sec61a1P61620 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Sec61a1P61620 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Sec61a1P61620 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.87□□□□□ -0.19
Sec61a1P61620 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sec61a1P61620 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Sec61a1P61620 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sec61a1P61620 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sec61a1P61620 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.87□□□□□ -0.19
Sec61a1P61620 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sec61a1P61620 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sec61a1P61620 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sec61a1P61620 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.87□□□□□ -0.19
Sec61a1P61620 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sec61a1P61620 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sec61a1P61620 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms